| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1351 |
|---|
| Symbol | |
|---|
| ID | 4479484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1564352 |
|---|
| End bp | 1564759 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639725906 |
|---|
| Product | flagellar biosynthesis protein, FliO |
|---|
| Protein accession | YP_868991 |
|---|
| Protein GI | 117919799 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3190] Flagellar biogenesis protein |
|---|
| TIGRFAM ID | [TIGR03500] flagellar biosynthetic protein FliO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00422095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.37669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAT CGGTAATTCT CAGTCTAGTA GTAGCAACTC AGGCGAGTGT TGCTGGCGTT
GCTAACGAAA GTACCGCGAC AGCAACGAAA GTGGCTGAAC CTTCGCAAAT GGCCGCCGCA
GCGAGCATGC TTGGCGGTCT TATTTTAGTG TTATTGCTTA TCTTCGCTTT AGCGTATCTG
CTGCGGCGAT TTAATTTGGT GCCGACAAAT CACAGTGTGC TGAAAACCCT CGCGGTAACA
TCGCTTGGAC AGAAGGAGCG TTTGGTACTC GTTCAGGTCG GCGAGCAGCA GTATTTGTTG
GGTGTTAGCG GGCAACAGGT TAATTTAATT GATAAATTAG CTGAACCTAT CGAAATTGAG
TCCACTTCCT TTGCGGACAA GCTACGGCAG GCGAAATTAA AACAATGA
|
|---|
| Protein sequence | MSTSVILSLV VATQASVAGV ANESTATATK VAEPSQMAAA ASMLGGLILV LLLIFALAYL
LRRFNLVPTN HSVLKTLAVT SLGQKERLVL VQVGEQQYLL GVSGQQVNLI DKLAEPIEIE
STSFADKLRQ AKLKQ
|
|---|
| |