Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1344 |
Symbol | fliH |
ID | 4479477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1557627 |
End bp | 1558589 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725899 |
Product | flagellar assembly protein H |
Protein accession | YP_868984 |
Protein GI | 117919792 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.388859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTCCT CTAATCGGAG TGACAATAGC GACAATAAAT TGTCCCATCG GGTGGTGAGC GACTCGGAGA TCGAGTTCAG CCATTGGCAA TTACCCGATG TGACCCAAAC CGAAGAGGTG AGTATTTCAA ACCTCTTTGG TTATTCGCCG CAGCAAGCGC CGAAGGCGGT GGCCGCCGAA ACCATTGCGC CACCCACCAT GGCGGAAATT GAAGATATTC GCGCTCAAGC CGAAGAAGAA GGTTTTAACG AAGGTAAGAC GCAAGGTTAT GCCGAAGGAC TGGAGCAGGG CAGACTCGAA GGTTTAGAGC AAGGCCATAC CGAGGGCCTA GCCCAAGGTC ATGAGCAAGG GCTTGAGGCT GGGCTTGCTG AAGCCAAGGC ATTAGTCAGC CGCTTCGAAG GACTGTTAAG CCAATTTGAA AAGCCATTGC AATTACTCGA TGGCGATATT GAACATTCCT TAATGACACT CACTATGGCG CTGGCCAAAT CTGTGATTGG TCATGAACTT AAAACTCATC CAGAACAAAT CCTGTCGGCG CTACGTTTAG GGGTCGAATC TCTGCCAATC AAGGAGCAAA GCGTCAGTAT TCGCATGCAT CCCGATGATG TTGCCTTGGT GGAGCAGCTA TATTCCAGTA CCCAATTGAA CCGTAATCAG TGGCAGTTAG AGGCCGATCC CAGCTTAAAT TCTGGGGATT GTATTATCAG CAGCCAACGC TCGCTGGTGG ACTTAACCCT GTCCTCGCGC ATCGATGCGG TGTTTGAGTC CTTACGTAAT CAACAGTCCC ATTTGAGTCA CCAGCAGCAA CAGCGCCAAG CGGTTCTCGA TGAGGAAAAC GCTGCAAAAC GGGGATCGAG TTCAGAGCTA GGTGACGAGG CGCAGAGCAC CGAGTCCCTG AGTACAGAGT CGCAAGCTGA TGGAGAGCAA GATGCAAAAT CGCCGCCATC AACTGCTGAA TAA
|
Protein sequence | MSSSNRSDNS DNKLSHRVVS DSEIEFSHWQ LPDVTQTEEV SISNLFGYSP QQAPKAVAAE TIAPPTMAEI EDIRAQAEEE GFNEGKTQGY AEGLEQGRLE GLEQGHTEGL AQGHEQGLEA GLAEAKALVS RFEGLLSQFE KPLQLLDGDI EHSLMTLTMA LAKSVIGHEL KTHPEQILSA LRLGVESLPI KEQSVSIRMH PDDVALVEQL YSSTQLNRNQ WQLEADPSLN SGDCIISSQR SLVDLTLSSR IDAVFESLRN QQSHLSHQQQ QRQAVLDEEN AAKRGSSSEL GDEAQSTESL STESQADGEQ DAKSPPSTAE
|
| |