Gene Shewana3_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1344 
SymbolfliH 
ID4479477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1557627 
End bp1558589 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content51% 
IMG OID639725899 
Productflagellar assembly protein H 
Protein accessionYP_868984 
Protein GI117919792 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.388859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCT CTAATCGGAG TGACAATAGC GACAATAAAT TGTCCCATCG GGTGGTGAGC 
GACTCGGAGA TCGAGTTCAG CCATTGGCAA TTACCCGATG TGACCCAAAC CGAAGAGGTG
AGTATTTCAA ACCTCTTTGG TTATTCGCCG CAGCAAGCGC CGAAGGCGGT GGCCGCCGAA
ACCATTGCGC CACCCACCAT GGCGGAAATT GAAGATATTC GCGCTCAAGC CGAAGAAGAA
GGTTTTAACG AAGGTAAGAC GCAAGGTTAT GCCGAAGGAC TGGAGCAGGG CAGACTCGAA
GGTTTAGAGC AAGGCCATAC CGAGGGCCTA GCCCAAGGTC ATGAGCAAGG GCTTGAGGCT
GGGCTTGCTG AAGCCAAGGC ATTAGTCAGC CGCTTCGAAG GACTGTTAAG CCAATTTGAA
AAGCCATTGC AATTACTCGA TGGCGATATT GAACATTCCT TAATGACACT CACTATGGCG
CTGGCCAAAT CTGTGATTGG TCATGAACTT AAAACTCATC CAGAACAAAT CCTGTCGGCG
CTACGTTTAG GGGTCGAATC TCTGCCAATC AAGGAGCAAA GCGTCAGTAT TCGCATGCAT
CCCGATGATG TTGCCTTGGT GGAGCAGCTA TATTCCAGTA CCCAATTGAA CCGTAATCAG
TGGCAGTTAG AGGCCGATCC CAGCTTAAAT TCTGGGGATT GTATTATCAG CAGCCAACGC
TCGCTGGTGG ACTTAACCCT GTCCTCGCGC ATCGATGCGG TGTTTGAGTC CTTACGTAAT
CAACAGTCCC ATTTGAGTCA CCAGCAGCAA CAGCGCCAAG CGGTTCTCGA TGAGGAAAAC
GCTGCAAAAC GGGGATCGAG TTCAGAGCTA GGTGACGAGG CGCAGAGCAC CGAGTCCCTG
AGTACAGAGT CGCAAGCTGA TGGAGAGCAA GATGCAAAAT CGCCGCCATC AACTGCTGAA
TAA
 
Protein sequence
MSSSNRSDNS DNKLSHRVVS DSEIEFSHWQ LPDVTQTEEV SISNLFGYSP QQAPKAVAAE 
TIAPPTMAEI EDIRAQAEEE GFNEGKTQGY AEGLEQGRLE GLEQGHTEGL AQGHEQGLEA
GLAEAKALVS RFEGLLSQFE KPLQLLDGDI EHSLMTLTMA LAKSVIGHEL KTHPEQILSA
LRLGVESLPI KEQSVSIRMH PDDVALVEQL YSSTQLNRNQ WQLEADPSLN SGDCIISSQR
SLVDLTLSSR IDAVFESLRN QQSHLSHQQQ QRQAVLDEEN AAKRGSSSEL GDEAQSTESL
STESQADGEQ DAKSPPSTAE