Gene Shewana3_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1341 
Symbol 
ID4479474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1554533 
End bp1554871 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content44% 
IMG OID639725896 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_868981 
Protein GI117919789 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.674522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTG GCGCGAATTC ATTACTGCAA GAAATGCAGT CACTTCAAGG TGAAATCAAA 
CCCTCTTTTG GGATTTCACC TAATAATATT GTGCAGCAAG TGAATAACAC CAGTGGTGCT
GACTTTGGCC AGCTACTTTC ACAAGCCATT GGTAATGTGA GTGGTTTGCA GTCAACCTCA
TCTAACCTCT CGACTCGCTT AGAAATGGGT GATACCACCG TGAGCTTGTC TGATACTGTT
ATCGCCCGCG AAAAGGCCAG TGTTGCCTTT GAAGCCACTG TACAAGTGCG CAATAAGCTC
GTTGAAGCTT ATAAAGAAAT AATGAGCATG CCTGTTTAG
 
Protein sequence
MQIGANSLLQ EMQSLQGEIK PSFGISPNNI VQQVNNTSGA DFGQLLSQAI GNVSGLQSTS 
SNLSTRLEMG DTTVSLSDTV IAREKASVAF EATVQVRNKL VEAYKEIMSM PV