Gene Shewana3_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1333 
Symbol 
ID4478847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1546601 
End bp1547413 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content42% 
IMG OID639725888 
Productflagellin domain-containing protein 
Protein accessionYP_868973 
Protein GI117919781 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.885776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0549852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTA CAGTAAACAC AAACGTTACA TCTTTAAAAG CACAGAAAAA CTTAAATACT 
TCCGCTAGCG GTTTGGCCAC TTCAATGGAA CGTTTATCCA GTGGTCTTCG CATTAATAGC
GCAAAAGACG ACGCAGCAGG TTTAGCTATT TCTAACCGCT TAAATAGTCA GGTTCGTGGC
TTAGAAGTGG GTATGCGTAA CGCTAACGAT GCTATCTCTA TCGCCCAAAT TTCTGAAGGT
GCGATGCAAG AACAAACTAA CATGTTGCAA CGTATGCGTG ACTTAACTGT TCAATCGGAA
AACGGTGCCA ACAGTACCGA TGACTTAGAT GCAATACAAA AAGAGATTGA TCAGTTAGCA
TTAGAAATCA CTGAGATCGG TGATAATACG GCCTTTGGTA GTACTAAATT ACTTGATGGC
ACTTTCTCTG GTAAGACTTT CCAAGTAGGG CACCAATCAG GTGAAGATAT TACGATTTCT
GTGGCAAAAA CCACTGCATC AGCATTAAAG GTTGATAGTT TAGATATTAC AGGCTCTGCC
AGAGCCTCTG CACTGGCTGC GATTGATGCT GCAATTAAAA CCATTGATAG TCAGCGTGCG
GATCTTGGTG CTAAGCAAAA CCGTTTAGCC TATAACATCA GTAATAGTGC TAACACTCAG
GCCAACATTG CTGATGCGAA GAGTCGTATT GTGGATGTGG ATTTTGCGAA AGAAACATCG
CAAATGACCA AGAACCAAGT GTTACAACAA ACGGGTTCTG CGATGTTGGC ACAAGCTAAC
CAATTACCTC AAGTGGCCTT ATCACTACTT TAA
 
Protein sequence
MAITVNTNVT SLKAQKNLNT SASGLATSME RLSSGLRINS AKDDAAGLAI SNRLNSQVRG 
LEVGMRNAND AISIAQISEG AMQEQTNMLQ RMRDLTVQSE NGANSTDDLD AIQKEIDQLA
LEITEIGDNT AFGSTKLLDG TFSGKTFQVG HQSGEDITIS VAKTTASALK VDSLDITGSA
RASALAAIDA AIKTIDSQRA DLGAKQNRLA YNISNSANTQ ANIADAKSRI VDVDFAKETS
QMTKNQVLQQ TGSAMLAQAN QLPQVALSLL