Gene Shewana3_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1331 
SymbolflgL 
ID4478845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1544208 
End bp1545419 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content43% 
IMG OID639725886 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_868971 
Protein GI117919779 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.143794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0994213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTAT CATCCGCGCA GATCTTTAAT CAAAGCATTA CGAGTGTACT GCAAAAGCAA 
ACGGCAACTA GCAAGATCCT CGAACAGCTC AGTAGTGGCA AAAAAGTCAA TACTGCAGGT
GATGATCCTG TCGCGGCGCT AGGTATCGAT AACCTGAATC AACGCAATGC CTTAGTCGAT
CAATTTATGA AGAATATTGA CTACGCGACT AATCGATTAG CAGTAACTGA AAGTAAGTTG
GGGAGTGCCG AAAATCTGGC ATCTTCCATA CGTGAACAAG TTATGCGAGC GGTAAACGGC
ACTCTCGCGG ATTCTGAGCG GCAAATGATT GCCGATGAAA TGAAAGGCAG CTTAGAAGAA
CTCTTATCTA TTGCCAATAG TAAGGATGAA TCTGGCAATT ATATGTTTTC TGGCTACAGC
ACTGATAAAG AGCCTTTTGC TTTCGATAAC TCTACACCAC CCAAAATAGT TTATAGCGGT
GATTCTGGCA TTCGAAATAG TTTAGTGCAG TCTGGCGTTG CACTAGGAAC TAATGTCCCT
GGCGACACCG CTTTTATGAA AGCCCCCAAT GGACTTGGCG ATTATAGTGT CAATTATTTG
GCCAGCCAGC AGGGCGAGTT TAGTGTTAAA ACGGCGAAGA TTGCTGATCC AGCAACTTAT
CTAGCTGATA CATATACATT TAATTTTTCA GATAATGGTT CTGGTGGAAC CAATTTACAA
GTACTTGATT CAGCCAATAA TCCAGTGGCG AACATTGCTA ATTTTGATGC GGCAACCCCT
GTAAGTTTTA ATGGTATTGA AGTCAACATT TCTGGAAAAC CCAGCGCTGG CGATAGTTTC
ACCATGGAGC CACAGTCTGA AGTCAGCATT TTCGATACAA TCAGTCGTGC GATCGCATTA
ATTGAAGATC CTAATTCAGC TAACACACCT CAAGGTCGAT CTCAGTTGGC ACAGATATTG
AATGACATCG ATAGTGGTGT CAATCAGATC AGTTCTGCCA GAAGTGTGGC GGGGAATAAT
CTGAAAGCCG TTGAAAGCTA CAAAGATACT CACATCGAGG AACAAGTGTT GAATACATCT
GCTCTTTCTC TACTTGAGGA TCTTGATTAC GCGTCAGCGA TTACGGAATT TGCAAAGCAG
CAGCTTGCAT TGAACGCAGT CTCTAGCGTG TTTAGTAAGG TGGGTTCTGT TTCCCTGTTT
GATTATATTT AA
 
Protein sequence
MRLSSAQIFN QSITSVLQKQ TATSKILEQL SSGKKVNTAG DDPVAALGID NLNQRNALVD 
QFMKNIDYAT NRLAVTESKL GSAENLASSI REQVMRAVNG TLADSERQMI ADEMKGSLEE
LLSIANSKDE SGNYMFSGYS TDKEPFAFDN STPPKIVYSG DSGIRNSLVQ SGVALGTNVP
GDTAFMKAPN GLGDYSVNYL ASQQGEFSVK TAKIADPATY LADTYTFNFS DNGSGGTNLQ
VLDSANNPVA NIANFDAATP VSFNGIEVNI SGKPSAGDSF TMEPQSEVSI FDTISRAIAL
IEDPNSANTP QGRSQLAQIL NDIDSGVNQI SSARSVAGNN LKAVESYKDT HIEEQVLNTS
ALSLLEDLDY ASAITEFAKQ QLALNAVSSV FSKVGSVSLF DYI