Gene Shewana3_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1328 
SymbolflgI 
ID4478842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1539952 
End bp1541043 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID639725883 
Productflagellar basal body P-ring protein 
Protein accessionYP_868968 
Protein GI117919776 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0568829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATA GACTGATTGT CGCACTTGCC ATGTTAGTGC TTTCTCTACC TAGTCAGGCC 
GAAAGAATTA AAGATATTGC TAATGTTCAG GGGGTTCGCA GTAACCAGTT AATTGGTTAT
GGCTTGGTTG TTGGTTTACC CGGTACTGGC GAGAAAACCA ATTATACCGA GCAAACCTTT
ACAACGATGT TGAAAAATTT CGGGATCAAT TTACCAGATA ATTTTAGACC TAAAATCAAA
AACGTAGCCG TAGTGGCCGT TCACGCCGAT ATGCCTGCGT TTATTAAACC TGGGCAACAA
TTAGATGTTA CTGTATCTAG TTTAGGCGAG GCCAAAAGCC TGCGTGGTGG CACGCTATTG
CAGACGTTCC TCAAAGGGGT CGATGGTAAT GTGTACGCTA TTGCCCAAGG GAGTTTAGTG
GTTAGTGGTT TTAGTGCAGA AGGTTTGGAT GGCTCTAAAG TCATTCAAAA TACCCCTACA
GTAGGCCGTA TTCCAAATGG TGCGATAGTC GAGCGTAGTG TAGCAACGCC ATTTTCAAGT
GGCGATTATT TGACGTTTAA TCTGCGCCGC GCCGATTTTT CAACGGCTCA ACGGATGGCT
GATGCTATTA ATGATTTACT CGGTCCCGAT ATGGCGCGCC CACTGGATGC AACATCAGTT
CAAGTGAGTG CTCCACGAGA TGTCTCACAA CGCGTATCCT TCCTTGCAAC CCTAGAAAAT
CTGGATGTTA TTCCTGCAGA AGAGTCGGCC AAGGTGATTG TTAATTCTCG AACTGGAACC
ATAGTAGTGG GTCAACACGT TAAATTATTG CCTGCTGCAG TAACCCATGG TGGTTTAACC
GTGACAATTG CTGAAGCGAC ACAAGTCTCT CAACCTAATG CATTGGCTAA TGGTGAAACC
GTAGTGACTG CCAACACCAC TATAGGTGTC AATGAAAGTG ATCGCCGCAT GTTTATGTTT
AGCCCGGGAA CCACTCTGGA TGAGTTGGTC AGAGCCGTCA ACTTAGTGGG TGCAGCACCT
TCAGATGTAC TTGCTATCCT AGAAGCATTA AAAGTGGCAG GTGCTTTGCA TGGTGAGCTT
ATCATCATCT AA
 
Protein sequence
MKYRLIVALA MLVLSLPSQA ERIKDIANVQ GVRSNQLIGY GLVVGLPGTG EKTNYTEQTF 
TTMLKNFGIN LPDNFRPKIK NVAVVAVHAD MPAFIKPGQQ LDVTVSSLGE AKSLRGGTLL
QTFLKGVDGN VYAIAQGSLV VSGFSAEGLD GSKVIQNTPT VGRIPNGAIV ERSVATPFSS
GDYLTFNLRR ADFSTAQRMA DAINDLLGPD MARPLDATSV QVSAPRDVSQ RVSFLATLEN
LDVIPAEESA KVIVNSRTGT IVVGQHVKLL PAAVTHGGLT VTIAEATQVS QPNALANGET
VVTANTTIGV NESDRRMFMF SPGTTLDELV RAVNLVGAAP SDVLAILEAL KVAGALHGEL
III