Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1319 |
Symbol | |
ID | 4478833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1532475 |
End bp | 1533395 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639725874 |
Product | response regulator receiver modulated CheW protein |
Protein accession | YP_868959 |
Protein GI | 117919767 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0920942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGTA TTCTTGATTC AGTCAACAAA CGCACCCAAC TCGTAGGTCA AAACCGACTA GAACTATTGC TATTTAAGTT GAATGGTCGT CAACGTTTTG GGATTAACGT ATTCAAAGTG AAAGAGGTTC TGCAGTGTCC ACCATTAACG GCCTTGCCTA AACTTAATCC CTACGTCAAA GGGGTGGCAC ATATTCGCGG AACGACCATT TCAGTGATCG ATTTAAGTGC CGCAACTGGC GGACGTCCGC TCGCGAGTAC CGAAAATTGC TTTATTATCA TTTCAGAATA TAACCGCAGC GTGCAAGGTT TCTTGGTCAG TTCAGTTGAA CGTATCATCA ACATGAATTG GGAAGCTATT ATGCCGCCAC CGCAAGGTGC TGGCCGTTAT TCCTATTTGA CGGCGGTGAC TGAAATTGAA GGCGAGTTAG TCGAAATTCT CGATGTTGAA AAGATTCTTG ATGAAATCTC CCCAGTAAAA ACCGCGATTA GTGAAGAAGT CAATGAGCAG CTCACTATCG ATAGAAGTCA GCATTATCAC ATCATGGTGA TTGATGATTC GGCTGTGGCT CGTAAACAGA TTATTCGCGC GTTGGAATCA TTAAACTTAC AGATTGATAC GGCAAAAGAT GGCCGCGAGG CATTGGACAA GTTAAAGGCG ATTGCTGGTG AAATGAACAA TGTCGCCGAA GAGATCCCAT TAATTATTTC TGATATCGAA ATGCCTGAAA TGGATGGTTA TACCTTAACG GCAGAAATCC GCGACGATCC AAAACTTAAG CATATTAAGG TCGTTTTACA TACCTCACTC AGCGGCGTGT TCAACCAGGC CATGGTGCAA AAAGTAGGCG CCAACGACTT TATCGCGAAA TTCAATCCTG ATGAATTAGC GGCAGCAGTG AACAAGCATT TAAGTTTGTA G
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Protein sequence | MSSILDSVNK RTQLVGQNRL ELLLFKLNGR QRFGINVFKV KEVLQCPPLT ALPKLNPYVK GVAHIRGTTI SVIDLSAATG GRPLASTENC FIIISEYNRS VQGFLVSSVE RIINMNWEAI MPPPQGAGRY SYLTAVTEIE GELVEILDVE KILDEISPVK TAISEEVNEQ LTIDRSQHYH IMVIDDSAVA RKQIIRALES LNLQIDTAKD GREALDKLKA IAGEMNNVAE EIPLIISDIE MPEMDGYTLT AEIRDDPKLK HIKVVLHTSL SGVFNQAMVQ KVGANDFIAK FNPDELAAAV NKHLSL
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