Gene Shewana3_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1319 
Symbol 
ID4478833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1532475 
End bp1533395 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content44% 
IMG OID639725874 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_868959 
Protein GI117919767 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0920942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGTA TTCTTGATTC AGTCAACAAA CGCACCCAAC TCGTAGGTCA AAACCGACTA 
GAACTATTGC TATTTAAGTT GAATGGTCGT CAACGTTTTG GGATTAACGT ATTCAAAGTG
AAAGAGGTTC TGCAGTGTCC ACCATTAACG GCCTTGCCTA AACTTAATCC CTACGTCAAA
GGGGTGGCAC ATATTCGCGG AACGACCATT TCAGTGATCG ATTTAAGTGC CGCAACTGGC
GGACGTCCGC TCGCGAGTAC CGAAAATTGC TTTATTATCA TTTCAGAATA TAACCGCAGC
GTGCAAGGTT TCTTGGTCAG TTCAGTTGAA CGTATCATCA ACATGAATTG GGAAGCTATT
ATGCCGCCAC CGCAAGGTGC TGGCCGTTAT TCCTATTTGA CGGCGGTGAC TGAAATTGAA
GGCGAGTTAG TCGAAATTCT CGATGTTGAA AAGATTCTTG ATGAAATCTC CCCAGTAAAA
ACCGCGATTA GTGAAGAAGT CAATGAGCAG CTCACTATCG ATAGAAGTCA GCATTATCAC
ATCATGGTGA TTGATGATTC GGCTGTGGCT CGTAAACAGA TTATTCGCGC GTTGGAATCA
TTAAACTTAC AGATTGATAC GGCAAAAGAT GGCCGCGAGG CATTGGACAA GTTAAAGGCG
ATTGCTGGTG AAATGAACAA TGTCGCCGAA GAGATCCCAT TAATTATTTC TGATATCGAA
ATGCCTGAAA TGGATGGTTA TACCTTAACG GCAGAAATCC GCGACGATCC AAAACTTAAG
CATATTAAGG TCGTTTTACA TACCTCACTC AGCGGCGTGT TCAACCAGGC CATGGTGCAA
AAAGTAGGCG CCAACGACTT TATCGCGAAA TTCAATCCTG ATGAATTAGC GGCAGCAGTG
AACAAGCATT TAAGTTTGTA G
 
Protein sequence
MSSILDSVNK RTQLVGQNRL ELLLFKLNGR QRFGINVFKV KEVLQCPPLT ALPKLNPYVK 
GVAHIRGTTI SVIDLSAATG GRPLASTENC FIIISEYNRS VQGFLVSSVE RIINMNWEAI
MPPPQGAGRY SYLTAVTEIE GELVEILDVE KILDEISPVK TAISEEVNEQ LTIDRSQHYH
IMVIDDSAVA RKQIIRALES LNLQIDTAKD GREALDKLKA IAGEMNNVAE EIPLIISDIE
MPEMDGYTLT AEIRDDPKLK HIKVVLHTSL SGVFNQAMVQ KVGANDFIAK FNPDELAAAV
NKHLSL