Gene Shewana3_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1311 
Symbol 
ID4478824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1525147 
End bp1526442 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content47% 
IMG OID639725865 
Producthypothetical protein 
Protein accessionYP_868951 
Protein GI117919759 
COG category[S] Function unknown 
COG ID[COG2604] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.508691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATT TACTACAACA GAATATGGCT ATTATCCGCC GTCGCTGGCC GGAAGTGGCT 
CAGACCATGG ACGCAGCAAA TCCCGACAGC CTGGATGCCA TGTTGGTGAC AGGTGCCAAT
CACACTATCA GCGTTAACGG TATCCAGCTC AGCAGCTGTT ATAATCGCTT GGCCGAAGCG
GAACTTATGA TAAATCAGCT TCCAGCTTGG TGCAGCACCG TTTCTGTTTA TGGGGTCGGC
ATGGGTGATG TACCCACCTT GCTCTCTGAT AACAAACACT TGGAACATAT TCGTATCTGC
CCGCTCAATT TGAATCTGTT AGTTTTGTTG CTCAGCTACA CAGATCAAAG CGAGTGGTTA
AGCGATCTGC GGGTAGTACT GGAACCCAAT CCCCGGCAAG ATGAGCTGGC GCAGCATTAC
ATTGCAATAA TATCTGATCT GCAGCTCATC AGTGACCATA ACGCCAGACT GCGTGATCTG
TTGATGTTTC ATAATAATCT TGCGTTTGCC AACAAGCGGC ACAAACCTGA AGATGTGAAA
TTTCAGCGCA GGTTGGCAGA CAATCTTGAG ACCATAAAAC AGGATCCCGA TGCTGCATCA
CTAAGCTTGC TCTTTCAACC AAGCAAGACT TTGGTTATAG GTACGGGTCC GTCGCTGGAA
CAGCATTATG ATTATTTGAG GGCACAAATG GCATTACCCT TGGCAACACG GCCCCTGATG
ATAGCTGTAG ATACGGCATT AAAAGCCTTG GTCAACGAAA ATATCATTCC GGATATTGTC
ATAAGCTTGG ATTACAACAT TTCTCTTGCT CACTTGCCCG AAGTGCTTCC GGAAAAAGTT
AAATTGGTCT ATTTTCCCAG GTCTCAGCCA CAGGTATTGC ATGCCTGGCC CGGGGAGCGC
TTCGCTGCCT ATTCGCTCAA TGAAACCTAT GATGAACTCA ACAGCCGCTA TCCCAAGCTG
CGCTTGTTTG CCAATGGCAG TGTCATACAT CCGGCCATTG ACTTGGCGGT ATACCTGAAG
AGTAAACAAA TCATCTTATT TGGTTGTGAC TTCTGTTATC CCAAAAACAA GACCCATGCC
TTCTGGCCCG AGGGCAAGCT CGGGCCCTCA ATAACAGACT CCAAACACCA CTGGGTCATC
AACGGGCATG GAGATAAAGT GATTACTCAC TTGAATTTCC GTGGTTATTT ACTCGCACTG
GAACACTATA TCCGCACAAA ACCAGAGGTG GCATTTTATA ACTCGAGTCT GGAAGGCGCC
GCCATTAAAG GAACCCTTTA TCTGGAGTGT AAATGA
 
Protein sequence
MTDLLQQNMA IIRRRWPEVA QTMDAANPDS LDAMLVTGAN HTISVNGIQL SSCYNRLAEA 
ELMINQLPAW CSTVSVYGVG MGDVPTLLSD NKHLEHIRIC PLNLNLLVLL LSYTDQSEWL
SDLRVVLEPN PRQDELAQHY IAIISDLQLI SDHNARLRDL LMFHNNLAFA NKRHKPEDVK
FQRRLADNLE TIKQDPDAAS LSLLFQPSKT LVIGTGPSLE QHYDYLRAQM ALPLATRPLM
IAVDTALKAL VNENIIPDIV ISLDYNISLA HLPEVLPEKV KLVYFPRSQP QVLHAWPGER
FAAYSLNETY DELNSRYPKL RLFANGSVIH PAIDLAVYLK SKQIILFGCD FCYPKNKTHA
FWPEGKLGPS ITDSKHHWVI NGHGDKVITH LNFRGYLLAL EHYIRTKPEV AFYNSSLEGA
AIKGTLYLEC K