Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1309 |
Symbol | |
ID | 4478822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1524119 |
End bp | 1524835 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725863 |
Product | acylneuraminate cytidylyltransferase |
Protein accession | YP_868949 |
Protein GI | 117919757 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
TIGRFAM ID | [TIGR03584] pseudaminic acid CMP-transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.774986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTG CCATAATTCC AGCCAGAGGC GGCAGTAAAA GAATACCAGG GAAAAATATT CGTCTGTTCC ATGACAAACC CATTATTGTG TGGTCCATCG AGGCGGCACT TGCCAGCGGT TGCTTTGATA AAGTCATTGT TTCTACTGAT GATCCAAATA TTACCGACAT TGCGATTCAG GCCGGTGCAG AAGCCCCCTT TATGCGACCA GCTGAATTAT CAGACGATAT GACAGGAACC ATGGCGGTGA TCCGCCATGC CATCCACTGG CTAAATGGCA CCTTGTCTCG GCAAAGTGGG GATATGGAGC TTACCCATGT GTGTTGTATA TATGCCACGG CCCCCTTCAT CAGCGCCGAA GACATCAAAA TTGGCTTGCA GAAGCTGACT AGTGGTGAAA ACGACTACGC CCTGGCCGTC ACCAATTTTG AATTTCCCAT TCAACGTGCA GTGATACTCA ATGCACAACA TCAGCTTGAA ATGTTACAAC CCAACCACTT CATGACCCGC TCACAGGATC TGCCAATTGC ATACCACGAT GCAGGACAAT TTTGCTGGGG AACCACTGCA GCCTGGCTGC AACAGAAGGC CATCTTCACC AGCCCAACAG CACCGGTGTT TATTCCCAGT TATAGAGTGC AGGATGTTGA TACCGAAGAC GATTGGATAA GAGCTGAACT CATGTTCAAA GCCATTTATA CTATGCAGGG TGTGTGA
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Protein sequence | MKIAIIPARG GSKRIPGKNI RLFHDKPIIV WSIEAALASG CFDKVIVSTD DPNITDIAIQ AGAEAPFMRP AELSDDMTGT MAVIRHAIHW LNGTLSRQSG DMELTHVCCI YATAPFISAE DIKIGLQKLT SGENDYALAV TNFEFPIQRA VILNAQHQLE MLQPNHFMTR SQDLPIAYHD AGQFCWGTTA AWLQQKAIFT SPTAPVFIPS YRVQDVDTED DWIRAELMFK AIYTMQGV
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