| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1291 |
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| Symbol | |
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| ID | 4479865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1501877 |
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| End bp | 1503157 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639725845 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_868931 |
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| Protein GI | 117919739 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG ATGACACTCC CGACCTCGCC GCTCCGCCGG CGGGCAAGGT GGCGCCCGAG
GCTGTGGCGC TGCGTGCCCA GCCGCGTCCG GTCACGCGCC TGAACCGGCG CACGCTGGCC
ATCCTCGCGG GCGGCCTGTC GGTCGCCGTG CTTGGGGCCA CGATCTGGTC GCTGCAACCG
CATCGGCGCG GTACGGGCGA GCAAACCGAG CTTTACAACG TCGATCGCGT CTCGAAGTCC
GAAGGGCTGG ATGCGCTACC GACGGACTAC TCGAAGCTGC CGCCAGCCTT GCCGCACGAT
GTACCCGAGC TGGGGCCGCC GCTGCCGGGC GACCTCGGCC CGGCCATCGT GAAGTCGCAG
CAGCCGGTGA CAGCCGCCTA CGCGGCTCCC GGCCACGACC CGAACGATGC GCTGCGCAAG
GAAGCCGAAG CTGCCGCAGC ATCGTCCGTG TTCTTCCGCT CGGGTGCGCA GGCGGCCGCG
CCGGTCGCGC AGTCGCAGGC CGCCACCGCG CCGGGCTTCG CCGCCAATGC GGCGTTCGAC
CCGATGGCCG CCGGGCCGGC CTCGACGGCG GCCCAGCCTG CCGATCCGAC CGCCGTGCAG
AACCGGCAAG ACCAGAAGGA GGCTTTCCTG AAAGGCGGCT CTACGGAAAC CCGCAATTCC
GGCAACCTGA CCCTGCCGGC TTCGCCGTAT CAGGTCATGG CCGGAACGGT GGTTGCCGGA
GCGCTGGTGA CGGGCATCAA GTCGGACTTG CCCGGCGACG TGATCGCCAC TGTGACAGAG
CCGGTCTATG ACACGGCCAC CGGGCGTTTC CTGCTGATCC CGCAGGGTTC GCGCATCCTG
GGCAAATACA ACAGCCAGGT CAGTTACGGG CAGAGCCGCG TTCAAGTCGT CTGGAATCGG
ATCATTCTGC CGGACACGTC TTCGTTGACG CTCGACAATC TGGCCGGCGC AGATCCGGCC
GGCTATGCCG GCCTGGAAGA CGATGTGGAC TACCACTGGG GCCGCATCTT TGCCGGTGCG
GCGCTGACGA CCCTGCTGGG CGTCGGCGCC GAACTGGCCG CGCCGGAGAA TCGACAAGAT
GGCGATCGCG TCATCATCGC CGGGCGTGAC AGTTTGCAGG ACACGGTGAA TCAAATCGGC
CAGGAAGTGA CCCGGCGCAA CCTCAACATC CAGCCCACCT TGACCCAACG GCCCGGCCTG
CCGGTGCGGA TCATCGTCAA CCGCGACTTG GTGTTGCGGC CGTACCAGCC GCTGTTCTTC
AATCGGGGGA CTTCACGATG A
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| Protein sequence | MSQDDTPDLA APPAGKVAPE AVALRAQPRP VTRLNRRTLA ILAGGLSVAV LGATIWSLQP
HRRGTGEQTE LYNVDRVSKS EGLDALPTDY SKLPPALPHD VPELGPPLPG DLGPAIVKSQ
QPVTAAYAAP GHDPNDALRK EAEAAAASSV FFRSGAQAAA PVAQSQAATA PGFAANAAFD
PMAAGPASTA AQPADPTAVQ NRQDQKEAFL KGGSTETRNS GNLTLPASPY QVMAGTVVAG
ALVTGIKSDL PGDVIATVTE PVYDTATGRF LLIPQGSRIL GKYNSQVSYG QSRVQVVWNR
IILPDTSSLT LDNLAGADPA GYAGLEDDVD YHWGRIFAGA ALTTLLGVGA ELAAPENRQD
GDRVIIAGRD SLQDTVNQIG QEVTRRNLNI QPTLTQRPGL PVRIIVNRDL VLRPYQPLFF
NRGTSR
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