Gene Shewana3_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1269 
Symbol 
ID4479843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1483049 
End bp1483843 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content59% 
IMG OID639725823 
ProductXRE family transcriptional regulator 
Protein accessionYP_868909 
Protein GI117919717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCT TGAAACGAAC TCGCGACGAA CTCGGGGCTT TTTTGCGCGC ACGTCGTGAA 
CGGTTATCGC CCACTGATTT AGGCCTCCCT AGTGGAGGAC GTCGGCGTAC GCCAGGGCTT
CGCAGAGAGG AGGTGGCAGC ACTCGCCGGT GTTGGGCTGA CTTGGTATAC ATGGCTGGAG
CAAGGCCGTG ACATAGGCGT GTCAGCCACG TTCCTGGACA ATTTGGCAAG GGTACTGAAG
CTAGATGCAG CAGAGCGCCG CCACCTGTAT CTGTTGGCCC ACGAACGCCC ACCAGCCGAA
CCAGGCAAAA CCTGGTGCGT GCTGCCGCCA CTGGTGCGAC GTTTGATGCT CGACTTGCCG
CACCCCGCCT TCGTGCTCAA CCTGCGCTGG GACGTGCTGG GCTTCAATGC GCCAGCTGAT
GCACTGTTCG GCTTTGGCAA GCACGCCCCC GAACGTCGCA ACCTGCTATG GATGCTGTTT
ACCGATTCCG TCCTGCACGA GCGCGTGGAC GCCTGGGAAG AGCAAGCCCA GCAAATGCTG
TCGAGCTTTC GTCTCGATTT CGCCCGAGCC ACCCAGGAAG TAGACATCCA TGAATTGGTG
GACGAGCTGA AACGGGTGTC GCCGGAATTC AAAATGTGGT GGCGAGCGCA CGATGTGCAC
GCCCCCTGTA ACGGCGTGCG CGATTTTAAA CTGGATGGTG AGGTGGTTGA ATTTGAGCAC
ACTTCGTTGA CCATCGACGC AGAACGCCAT CTGCGCTTGG TGGTCTATGC GAAAGTCGAG
ACAACAGCTT ACTAA
 
Protein sequence
MRTLKRTRDE LGAFLRARRE RLSPTDLGLP SGGRRRTPGL RREEVAALAG VGLTWYTWLE 
QGRDIGVSAT FLDNLARVLK LDAAERRHLY LLAHERPPAE PGKTWCVLPP LVRRLMLDLP
HPAFVLNLRW DVLGFNAPAD ALFGFGKHAP ERRNLLWMLF TDSVLHERVD AWEEQAQQML
SSFRLDFARA TQEVDIHELV DELKRVSPEF KMWWRAHDVH APCNGVRDFK LDGEVVEFEH
TSLTIDAERH LRLVVYAKVE TTAY