Gene Shewana3_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1238 
Symbol 
ID4477158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1447605 
End bp1448273 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content51% 
IMG OID639725793 
ProducttRNA-adenosine deaminase 
Protein accessionYP_868879 
Protein GI117919687 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCAGA CAAAACTGAA TCCAAAAACC TTGCATGCGA AGACGCTTAG CTCCGATGAA 
CTTGGCTCTG ATGAACTTGG CTCTGATGAA GCTAGTGGTA ATGTGCTAAT TGGCGAGCAA
CCTTGTCTCA ATCAAGCGAG TCTCAATCAA GCGGATATTG AACAAGCTCG AGTCGATGAA
CATTGGATGC GTGTCGCGAT GAGTATGGCT GAAAAGGCCG AAGCAGCGGG TGAAGTACCA
GTGGGGGCGG TTTTAGTCAA AGGTGGTCAG CAAATCGCGG CCGGATATAA CTTGTCTATC
AGTGAGCACG ACCCCTGCGC CCATGCTGAA ATTCAGTGCT TGCGAGCAGC GGGGCAAACG
ATTGAAAACT ATCGACTCCT CGATACCACT CTTTACGTAA CTCTTGAGCC TTGTGCGATG
TGCGCCGGTG CCATGGTGCA TAGCCGGATT GCCCGCGTGG TATTTGGGGC GAAAGATGAG
AAGACGGGCG CCGCAGGAAC CGTGCTTAAT CTCTTGCAGC ATCCAGCCTT TAATCATCAA
GTTGAGGTCA CATCTGGGGT GTTAGCGCAG GACTGTGCTG ACCAATTGAG CCGCTTTTTT
AAACGTCGCA GGGAGGAAAA GAAGGCTTTA AAACAGGCTC AAAAGGCGCA GCAGGGGACG
CTATCCTAA
 
Protein sequence
MEQTKLNPKT LHAKTLSSDE LGSDELGSDE ASGNVLIGEQ PCLNQASLNQ ADIEQARVDE 
HWMRVAMSMA EKAEAAGEVP VGAVLVKGGQ QIAAGYNLSI SEHDPCAHAE IQCLRAAGQT
IENYRLLDTT LYVTLEPCAM CAGAMVHSRI ARVVFGAKDE KTGAAGTVLN LLQHPAFNHQ
VEVTSGVLAQ DCADQLSRFF KRRREEKKAL KQAQKAQQGT LS