Gene Shewana3_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1211 
Symbol 
ID4477131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1415301 
End bp1416125 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content51% 
IMG OID639725766 
Producthypothetical protein 
Protein accessionYP_868852 
Protein GI117919660 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCAG TTTTCATTAC CCTAACGCTT GGCCTCGGTG CGATCGCTTG GTTAGCGTCG 
AGCCGCTGGC GCAAGACGCT CCACCGCAAG CGCGTAATGG CCAGCGCCTT TCCTAAGGCT
TGGCGAACAA TTTTGAAGAA AAGATTGCCT TATTTCCACG CCTTGCCAGC GGATCTTCAG
CTGCAACTCA AACGCCATAT CCAAGTCTTT TTGGATGAGA AACGATTCGT CGGCTGCGAC
GGTTTGCAAA TAACCGACGA AATTCGCGTC ACCATCGCCG CCCAAGCATG CTTGCTTCTG
CTAAACCGCA ATACCGATTT TTACCCCAAT CTAAGGCAGA TATTGGTCTA TCCCGATGCT
TTTATTGTCG ATAGCCAACA CCAAGATCCC GCGGGTTTGA TCTGGGAGCA ACGCAATGTG
CTGGCAGGGG AATCCTGGGA GCAAGGCCAA GTGATACTGT CGTGGAAGAA TACTTTAGAG
GGCGCTGCCA ATCCCCACGA TGGCAACAAC GTGGTGATCC ACGAGTTTGC CCATCAATTA
GATCAAGAAG ATGGCCACGC CAATGGCGCG CCGATTTTAC AGCGCCGCCA AGATTATCTG
TCGTGGTCGA GCGTATTTAG TCAGGCCTTT AATGAGTTAG TTCAAGCTGC CGCCCTTGGC
CGCCCGTCCC TGTTTAATTA CTATGGTGCC ACCAATCCAG CAGAATTTTT TGCCGTAGTG
ACTGAGGTCT TTTTTGAAAA GCCAGAAGCA CTTAATCTAG AGCATCCAGC CCTTTACCGC
GAGTTGAGCC ATTTTTATCA ACTCGATCCG ATAAACTGGC ATTGA
 
Protein sequence
MLAVFITLTL GLGAIAWLAS SRWRKTLHRK RVMASAFPKA WRTILKKRLP YFHALPADLQ 
LQLKRHIQVF LDEKRFVGCD GLQITDEIRV TIAAQACLLL LNRNTDFYPN LRQILVYPDA
FIVDSQHQDP AGLIWEQRNV LAGESWEQGQ VILSWKNTLE GAANPHDGNN VVIHEFAHQL
DQEDGHANGA PILQRRQDYL SWSSVFSQAF NELVQAAALG RPSLFNYYGA TNPAEFFAVV
TEVFFEKPEA LNLEHPALYR ELSHFYQLDP INWH