Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1204 |
Symbol | |
ID | 4477124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1408934 |
End bp | 1409575 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725759 |
Product | hypothetical protein |
Protein accession | YP_868845 |
Protein GI | 117919653 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0582912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAG CGCAATTTAT CGGATTATTA TGGCTGATTG GGATTTTAGC CGAGGCCATG ACAGGGGCAT TAGCGGCGGG TCGTAAGCAG ATGGACCTAT TCGGCGTGGT TATCATTGGC TGCGCGACGG CAATTGGTGG TGGCACCCTA AGAGACATGC TGCTCGGAAA TTACCCTTTG ATTTGGGTCG AGAATGTCCA TTACCTGCTC GCGATTGCAT TTGCGTCTTT ACTAACGGTC GCCATTGCGC CTGTGATGCG TTACCTGTCT AAGTTATTCT TGGCCATTGA TGCCTTAGGC CTAGCCGTAT TCTCGATTGT TGGCGCCCAA AAAACCCTAA TGTTAGGCTT TAGTCCAACG ATTGCGGTGG TGATGGGGCT CGTCACAGGG GTCTTTGGCG GGGTGATCCG CGATATTCTC TGTAATCAAG TGCCTTTGAT TTTTAAGAAA GAACTCTATG CGGTGATTTC GCTCTTTACC GCAGGCTTAT ATATCACCCT CAACGCTTAT CAATTGGCTG AGTGGATAAA CCTAGTGGTC TGTTTAACGC TTGGCTTTAG CTTACGAATG TTAGCGCTGC GTTATCATTG GTCTATGCCG ACCTTTGACT ATCAAGCCAA TGGCGACCAA CATACGCACT AA
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Protein sequence | MQEAQFIGLL WLIGILAEAM TGALAAGRKQ MDLFGVVIIG CATAIGGGTL RDMLLGNYPL IWVENVHYLL AIAFASLLTV AIAPVMRYLS KLFLAIDALG LAVFSIVGAQ KTLMLGFSPT IAVVMGLVTG VFGGVIRDIL CNQVPLIFKK ELYAVISLFT AGLYITLNAY QLAEWINLVV CLTLGFSLRM LALRYHWSMP TFDYQANGDQ HTH
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