Gene Shewana3_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1201 
Symbol 
ID4479884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1407047 
End bp1407376 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content47% 
IMG OID639725756 
Producttranslation initiation factor Sui1 
Protein accessionYP_868842 
Protein GI117919650 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0177618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.884447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTAG ATCCCAACGT TTCCTTAGTG TACAGCACAG ATAAAGGCCG CATTACTGCC 
GAGCCAGAAG CCAAAGCTAT CCCCGCATCC GATGGGATTG TGCGTATCCA CAGAGACAGC
AAAGGCCGCA AAGGTAAAGG TGTCTCGGTC ATTTCAGGCC TAGGGCTTGA TGAAGCGGGC
TTAAAAGCCC TGGCACAAAC CCTTAAAAAA CAATGTGGTT GTGGTGGCAC AGTCAAAGAT
TTCACTATCG AAGTGCAAAC CGATAATCGT GAACAACTAA AACAACTGCT TGAAAAACAA
AACTACAAAG TCAAATTAGC CGGCGGTTGA
 
Protein sequence
MRVDPNVSLV YSTDKGRITA EPEAKAIPAS DGIVRIHRDS KGRKGKGVSV ISGLGLDEAG 
LKALAQTLKK QCGCGGTVKD FTIEVQTDNR EQLKQLLEKQ NYKVKLAGG