| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1188 |
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| Symbol | |
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| ID | 4478705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1396824 |
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| End bp | 1397981 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725743 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_868829 |
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| Protein GI | 117919637 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTGA ATGTGTCACC TCAGTTAACC CTGCCGCCGT TGAGCCTGTA CATCCATATC
CCTTGGTGTG TACAAAAATG CCCTTACTGC GACTTTAACT CCCATGGGCA AAACGGTGAA
TTACCCCAAA AGGCCTATGT GGATACGCTG CTAGCGGACT TACGCCAAGA CTTGCACTTA
GTACAAGGCC GTAAGTTACA CACCATTTTT ATTGGTGGTG GAACGCCGTC TCTGTTTGAT
GCTAATCAAA TCAAACGGAT ATTGGATGGC GCCAATGCGC TCATTCCCTT CAGTGACGAT
ATTGAAATCA CCATGGAGGC CAACCCTGGC ACCCTAGAGC ACGATGACTT TAGTGCCTAC
CGCGCCGCAG GGGTCACCCG ATTATCCATT GGGGTGCAGA GTTTCTCTAA GGATAAGCTC
AATCTGCTGG GGCGGATCCA CGATCAAAAC GAAGCCCAAA CCGCCGCCCA AAAAGCCAGC
CAAGCGGGTT ATTTAAGTTT TAACTTGGAT TTGATGCACG GACTTCCGAA TCAAAGTTTT
GCTGAGGCCA TGGCGGATAT AGATACCGCT GCGGCGCTCA ATCCGCCGCA TTTGTCTTGG
TACCAACTGA CGATTGAGCC CAATACCCTG TTCCACTCAA AACCGCCGCA GCTGCCCGAC
GATGAAGATC TCTGGCAGAT CTACGAACAA GGGCAACAAA AGTTAGCGGC ACTCGGTTAT
GAACAGTATG AAATCTCGGC CTATGCCAAA CCCGGTTATC AATGCAGGCA TAACCTTAAC
TATTGGCAGT TTGGTGATTA CTTAGGCATT GGCTGTGGCG CCCATGGCAA AGTGACCTTG
CCCGAAGAAA ATCGCATTAT TCGCACGGTA AAAATCAAAC ACCCTAAGGG GTATTTAGCT
GCCGACAACT ATCACTTCGA GCAGACTGAG GTCGCCGAAG AAGATCGCGC CCTCGAATAC
TTGATGAATC GTCTGCGCTT AATGACACCT ATCCCTAAGC AAGAGTTTGA AGACAGAACC
GGTTTACACC GAGATTCTTT GAAAGAGGGA ATGGAAAAGG CCAAACAACG GGGTTTACTC
ACCGAATCTG CTGAACATTG GCAATTAACC AGTAAAGGTC ACATGTTTGT GAACGATTTA
CTGACGCAAT TTTGTTAA
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| Protein sequence | MSVNVSPQLT LPPLSLYIHI PWCVQKCPYC DFNSHGQNGE LPQKAYVDTL LADLRQDLHL
VQGRKLHTIF IGGGTPSLFD ANQIKRILDG ANALIPFSDD IEITMEANPG TLEHDDFSAY
RAAGVTRLSI GVQSFSKDKL NLLGRIHDQN EAQTAAQKAS QAGYLSFNLD LMHGLPNQSF
AEAMADIDTA AALNPPHLSW YQLTIEPNTL FHSKPPQLPD DEDLWQIYEQ GQQKLAALGY
EQYEISAYAK PGYQCRHNLN YWQFGDYLGI GCGAHGKVTL PEENRIIRTV KIKHPKGYLA
ADNYHFEQTE VAEEDRALEY LMNRLRLMTP IPKQEFEDRT GLHRDSLKEG MEKAKQRGLL
TESAEHWQLT SKGHMFVNDL LTQFC
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