| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1186 |
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| Symbol | |
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| ID | 4478703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1393260 |
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| End bp | 1394201 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725741 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_868827 |
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| Protein GI | 117919635 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.177283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAC TGTTAGAACC TATTGCGATT TTTACTCATG TGGCCAGAGC TGGTAGTTTT
AGTGCCGCCG CAAGAAGGCT TGGGATCTCT AAATCTAAGG TCAGTACGCA GGTCGCCGAT
CTCGAGCATA GACTCGGTGT TCAACTGATC CAGCGTACCA CCCGAAGCTT AAGTCTGACT
GAAGCTGGAC ATTTGTTATA TCTGCAAGGT GAAGAGTTGC TCCGCGATGC CGAACAGGCC
ATTGCTAGCG TGCATAACTT AAACGATGCC ACCCGCGGCG TGTTAAAGGT GGGGATTTCC
CAGTCCTTTG GCGCTATGCA TATCATTCCC GCACTGCCAT CATTTATGGC AAAACACCCT
GAGCTAGAGC TGCAAGTCAG CTTATTAGAT CATAAGGTGG ATGTGGTCAG CGAAGGTTTA
GACCTATTGT TGACTATGTC TGAGCAGCTT CCTCTCGGTA TGGTGGCGCG CCCTTTGATG
AAGTGTCAGT TCCTCCTCGT TGCCTCCCCC GATTACATTG CGAAACATGG CGAACCGTCG
CGCCCTGAAC AATTGGTCGA CCATAACTGC TTGGTGTATC AAGGCGAGTG GCATGAGCAC
AGCATGTGGC AGTTTAAAAA GGGCGATGAT TACTGTGAGA TAGGTGTCTC TGGTAACTTT
AGAGTGGATA ACGCTCCTGC TTTAAAATCA GCCGCAATCA GTGGCTTAGG GGTTGTATAT
CTTGCCAGCT ACTTGATGGA AGATGAAATC GCTAAGGGCA CCTTAGTGCC GCTGCTGAGG
GATTGGCAAC TGACTCATCA TTTACCGCTA CAGGCCGTTT ACCCACGCCG TAAACACTTA
GCGCCTAAGG TGAGTGCTTT CATTGAGTTT ATTAAAGACC ACATTGGTAA TCCGCCTTAT
TGGGACATTC CCTATGCGGA ACTCTTCAGT GAACGTCAGT AA
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| Protein sequence | MLELLEPIAI FTHVARAGSF SAAARRLGIS KSKVSTQVAD LEHRLGVQLI QRTTRSLSLT
EAGHLLYLQG EELLRDAEQA IASVHNLNDA TRGVLKVGIS QSFGAMHIIP ALPSFMAKHP
ELELQVSLLD HKVDVVSEGL DLLLTMSEQL PLGMVARPLM KCQFLLVASP DYIAKHGEPS
RPEQLVDHNC LVYQGEWHEH SMWQFKKGDD YCEIGVSGNF RVDNAPALKS AAISGLGVVY
LASYLMEDEI AKGTLVPLLR DWQLTHHLPL QAVYPRRKHL APKVSAFIEF IKDHIGNPPY
WDIPYAELFS ERQ
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