Gene Shewana3_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1171 
Symbol 
ID4478684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1381737 
End bp1382993 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content50% 
IMG OID639725722 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_868812 
Protein GI117919620 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA CTGCATCGCA ATCTTCTGTT ATTACGGCAA AATTGCCTGA CAGTCTGGCC 
CGTAAGCTAC TGCTTAAAGC ATTAGAAAAT CTCCCCCACG GCTGTTTAAC CTTAGTGGAG
GGCGACAAGA GCTATCGCTT TGGTGAGCAT CACAGTGATT TGCATGCCAC CCTGGTGGTG
AAGCATCCGA GCTTCTATCG CCAAGCGATG TTTTCGGGCT CCATTGGCGC CGGTGAAAGC
TATATCCAAG GTCACTGGAC TAGCCCGGAT CTCACTAAGG TGGTGCAGCT GTTTGCCCGC
AATCTCCCCT TGCTCGATAA GATTGAAGCG AAATTCGGTT GGCTGACTGG ATCGGTTAAC
CGTATGAAAC ATTTGCTGAA TCGCAACTCA CAGCAGGGTT CTAAACGTAA TATCTTGGCC
CATTACGACT TAGGTAATGC CTTGTATGAG CAGTTTTTAG ATCGCGAAAT GTTGTACTCC
AGCGCTCTTT ATCCCGATAG CGAAGCGAGT CTGGAACAGG CGCAGCTACA TAAATTAAAA
ACCATTTGTG AGCGGCTCGA CCTACAACCT GGGCAGACCT TACTCGAAAT CGGTACGGGG
TGGGGCGCCT TAGCCATTTA CGCAGCTAAA CATTATGGCG TGCACGTGAC GACCACAACG
ATTTCGGATG CGCAATATGC TTACGCGAAA GCGCGAGTCG AACGGGAAGG CTTAAGCGAT
AGCATCACCT TATTGACTGA GGATTACCGT AATCTCGGTG GCACCTACGA CAGACTAGTG
TCTATCGAGA TGATTGAAGC CGTTGGCCAT GAGTACCTGC CGGGGTTCTT TAAAAAGCTC
GAATCCTTAC TCAAACCCCA TGGCCGCATG TTATTGCAGG CTATCACCAT CGCCGACCAA
CGTTACGACA GTTATCGCAA GGGTGTTGAT TTTATTCAGC GATATATTTT CCCTGGCGGT
TGCTTACCTT CTGTGCACCA AATGGTTGGA CACTTGGCCA AGCGCACCGA TATGCAGGTG
TGGTCGATTG ATGATATGGG CCTCGATTAT GCCAAGACAC TGAGGGACTG GCATAACAAT
TTCGACCGCG CCATTGAGCA AGTGCAAGCC CTTGGCTATG GTGACGATTT TATCCGCATG
TGGAAGTTTT ACTTAAGTTA TTGCGAAGGA GGCTTTTTAG AGCGCACCAC GAGCACTGTG
CATTTGGTTG CGGTGCGCCC AGACTACCGT TTGCCGAATG CGGTGAGCGG TAACTAA
 
Protein sequence
MENTASQSSV ITAKLPDSLA RKLLLKALEN LPHGCLTLVE GDKSYRFGEH HSDLHATLVV 
KHPSFYRQAM FSGSIGAGES YIQGHWTSPD LTKVVQLFAR NLPLLDKIEA KFGWLTGSVN
RMKHLLNRNS QQGSKRNILA HYDLGNALYE QFLDREMLYS SALYPDSEAS LEQAQLHKLK
TICERLDLQP GQTLLEIGTG WGALAIYAAK HYGVHVTTTT ISDAQYAYAK ARVEREGLSD
SITLLTEDYR NLGGTYDRLV SIEMIEAVGH EYLPGFFKKL ESLLKPHGRM LLQAITIADQ
RYDSYRKGVD FIQRYIFPGG CLPSVHQMVG HLAKRTDMQV WSIDDMGLDY AKTLRDWHNN
FDRAIEQVQA LGYGDDFIRM WKFYLSYCEG GFLERTTSTV HLVAVRPDYR LPNAVSGN