| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1144 |
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| Symbol | |
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| ID | 4477857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1349390 |
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| End bp | 1352671 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639725695 |
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| Product | peptidase S41 |
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| Protein accession | YP_868785 |
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| Protein GI | 117919593 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4946] Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00183878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC GTCATTCTGT TGCCTGCTGC ATGCTCGCCC TTGGCACTTT GTCCGCAGCC
CACGCCATCG CTCAACCTGC CAGCAATCAA GGTTATTACC GTGCGCCAGC ATTGCATGAC
CAAACCTTAG TCTTTACGGC CGAAGGCGAT CTTTGGACTC AAACGCTCGG GCAAAAGGCG
GCGACGCGCC TGACCACTTT ACCCGCCGAA GAGTTAGGTG CGGCCATCTC CGCCGATGGT
AAATGGGTGG CTTATGTCGC CAATTATGAG GGCGCGAGTG AGGTTTATGT CATTCCTGTC
GCGGGTGGTG TGGCCAAACG AGTGAGTTTC GAAAACAGCC GAGTGCGCTT GCAAGGCTGG
ACCGCAAAGG GCGAAGTGCT TTATTCCACC GACAGTGGCT TTGGCCCTGC GAACAATTGG
ATGTTGCGAC TGGTTAACCC TGAGACCTTG GCGACGACCG ACTTACCACT CGCTGATGCG
GTGGAAGGGG TAGTCGATGC CAATAATCAA TATGTGTACT TTACCCGTTT TGGCCTGCAG
GTCACCGGCG ATAACGCTAA GGTTTATCGC GGCGGCGCTA AGGGTGAGTT ATGGCGCTTT
AAACTCGGCG GCAAAGACGA GGCGCAGTTG CTCAGTGGTC AGCATCAAGG TTCGGTGCGT
CAGCCTATGC TATGGCAAGA CAGACTCTAC TTTATCAGCG ACAGCGATGG TAACGACAAT
CTCTGGTCCA TGGCTCTGGA TGGCAGTGAC GCGAAACAGT TGACCCAATA TAAAGATTGG
CAGGTGCGCG GCGCGCGCAT GGACCAAGGT AAAGTCGTGT TCCAGCAGGG CGCCGATATT
CATGTTTTTG ATATCGCCTC TGCCAAAGAC TCATTATTAG ATATTGAATT AACGTCCGAT
TTTGCCCAGC GCCGCGAGCA TTGGGTAAAA GATCCTATGG ATTTTGCGAC CTCAGCGAAC
CTTGCGCTTG CGGGCGATAA AGTGGTTATC ACCGCCCGCA GCCATGTGGC GATTGCGGGA
ATTGATGGTT CACGTTTAGT GCAAGTGGCA CTGCCTGGTA CCTATCGCGT GCGCAATGCG
ATTATGAGTC AGGATGGTAA ATCGGTTTAT GCCATCAGCG ACATGAGTGG CCAGCAGGAA
ATTTGGCAAT TCCCTGCCGA TGGCAGCAGC GGCGCGAAGC AACTCACCAA AGATGGCCAT
ACCTTAAGAA TGACGCTGAG TCTGTCAAAC GATGGCCGTT ACCTTGCCCA CGACGATAAC
GATGGCAATG TGTGGTTGCT GGATCTGAAG AAAAATTCCA ATCAAAAAAT CATCAGCAAC
GGTGAGGGAC TAGGCCCCTA TGCAGATATT CGCTGGTCGG CCGACAGTCG TTTTATCGCG
TTAACTAAAT CCGAAATCGG TAAGCAAAGG CCACAAATCG TGCTGTATTC TGTGGACGAA
AATAAGGCAC AAACGCTCAC CAGTGACAAG TATGAGTCCT ATTCGCCGAC CTTTAGTCGC
GATGGCCAGT GGTTATATTT CCTCTCCAAT CGCCAGTTTA CTGCGACACC AAGTTCACCT
TGGGGCGACC GCAATATGGG GCCAGTGTTT GATAAACGCA GCCAGATTTT TGCGATTGCT
TTAGTGAAGA ATGCCAAGTT CCCCTTCAGC AAACCCACTG AGCTGACGGC TAAGACGGCG
GAAAAGACAG ACTCTAAAGA TAAGCCGACG CCAGTAAAAA TTGATTGGGC GGGAATTGGC
GAGCGTTTAT GGCAAGTGCC TGTCGATTCT GGCAATTACA GCCAGTTAAC TGCGATTGAT
GGTCGTCTCT ATGTGCTCGA CCAAGCCATT GGCGATGACA CTGAGCCTAG CTTAATGAGG
ATTAAGTTTA GCGAGCAGCG CCCTAAAGCC GAAGTGTTTG CCGAAGACGT GGCGAACTAC
AGTGTGTCCG CCGATGGTAG CAAGTTGTTG CTGCGCAAAA AAAGCAATGA AAAGTCGCTG
CTGATCGTCG ATGCGGGCGA CAAGTTGGGC GATACCGAAA ATGCCAAGGT GCAAACGGAT
CAGTGGCAAT TAGCGATTTC ACCCACCCTA GAATGGCAAC AAATGTTTGA AGATGCTTGG
TTAATGCATA GGGACTCCTT CTTCGATAAG AAGATGCGCG GCCTCGATTG GCAGGCGACC
AAGGCCAAGT ACCAGCCGCT ACTTGACCGT TTAACCGATC GTAACGAGTT AAACGATATC
TTTATGCAGA TGATGGGTGA GCTAGACTCG TTGCACTCGC AAGTGCGGGG TGGCGATCTG
CCAAAAGACC CAGACGCGGC CAAAGGCGCG AGTTTAGGCG CGCGGCTACA ACAAACTAAC
GATGGGGTAA AAATTGCCCA TATCTATCGT AATGATCCTG AACTGCCAAG CCAGGCATCG
CCCTTAAGCC GTATCGAAGT CGATGCGAAA GAAGGCGATA TGTTACTCGC CATCAATGGC
ACTCCTGTGA CTAATGTGGC CGATGTGACT CGTTTATTGC GTAATCAGCA GGATAAGCAG
GTATTACTCG AGCTTAAACG CGGCGGCCAA AACCATAAAA CCGTGGTGAT GCCGGTTAGC
ACTCAGGTCG ATAGCCAATT ACGTTATTTA GATTGGGTTA ACCACAACGC AGGTGTCGTG
ACCGAGGCGA GTAAGGGCAA GATTGGTTAC CTGCATTTAT ACGCCATGGG CGGCGGCGAT
ATTGAGAGTT TTGCCCGTGA GTTTTACACC AATTACGACA AGGACGGTTT GATTATCGAC
GTGCGCCGTA ACCGCGGTGG TAATATTGAT AGTTGGATCA TCGAAAAACT TTTACGCCGC
GCTTGGGCAT TCTGGCAGCC AACCCATGGC ACGCCTAATA CCAATATGCA GCAAACCTTC
CGTGGCCATT TAGTGGTGTT AACCGACGAG CTAACGTACT CAGATGGTGA AACCTTCTCG
GCGGGGATTA AGGCGCTGGG CATTGCTCCG CTCATTGGTA AGCAAACTGC GGGCGCAGGC
GTGTGGTTAT CGGGTCGTAA CTCACTCACA GATAAAGGCA TGGCGCGGGT CGCCGAATAT
CCGCAATATG CGATGGATGG CCGCTGGGTA CTCGAAGGAC ATGGGGTAAC ACCGGATATC
GAGGTGGATA ACTTACCCTT TGCGACCTTT AACGGCCATG ATGCGCAGCT CGAAACGGCC
ATCAGCTATC TTAAGGATGA GTTGATTAAG CAGCCTATCC CCGCATTGAA GGCGCAGCCC
ATGCCAGCGA AAGGAATGGC AGAAGACATA AAAGCTAAGT AA
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| Protein sequence | MKLRHSVACC MLALGTLSAA HAIAQPASNQ GYYRAPALHD QTLVFTAEGD LWTQTLGQKA
ATRLTTLPAE ELGAAISADG KWVAYVANYE GASEVYVIPV AGGVAKRVSF ENSRVRLQGW
TAKGEVLYST DSGFGPANNW MLRLVNPETL ATTDLPLADA VEGVVDANNQ YVYFTRFGLQ
VTGDNAKVYR GGAKGELWRF KLGGKDEAQL LSGQHQGSVR QPMLWQDRLY FISDSDGNDN
LWSMALDGSD AKQLTQYKDW QVRGARMDQG KVVFQQGADI HVFDIASAKD SLLDIELTSD
FAQRREHWVK DPMDFATSAN LALAGDKVVI TARSHVAIAG IDGSRLVQVA LPGTYRVRNA
IMSQDGKSVY AISDMSGQQE IWQFPADGSS GAKQLTKDGH TLRMTLSLSN DGRYLAHDDN
DGNVWLLDLK KNSNQKIISN GEGLGPYADI RWSADSRFIA LTKSEIGKQR PQIVLYSVDE
NKAQTLTSDK YESYSPTFSR DGQWLYFLSN RQFTATPSSP WGDRNMGPVF DKRSQIFAIA
LVKNAKFPFS KPTELTAKTA EKTDSKDKPT PVKIDWAGIG ERLWQVPVDS GNYSQLTAID
GRLYVLDQAI GDDTEPSLMR IKFSEQRPKA EVFAEDVANY SVSADGSKLL LRKKSNEKSL
LIVDAGDKLG DTENAKVQTD QWQLAISPTL EWQQMFEDAW LMHRDSFFDK KMRGLDWQAT
KAKYQPLLDR LTDRNELNDI FMQMMGELDS LHSQVRGGDL PKDPDAAKGA SLGARLQQTN
DGVKIAHIYR NDPELPSQAS PLSRIEVDAK EGDMLLAING TPVTNVADVT RLLRNQQDKQ
VLLELKRGGQ NHKTVVMPVS TQVDSQLRYL DWVNHNAGVV TEASKGKIGY LHLYAMGGGD
IESFAREFYT NYDKDGLIID VRRNRGGNID SWIIEKLLRR AWAFWQPTHG TPNTNMQQTF
RGHLVVLTDE LTYSDGETFS AGIKALGIAP LIGKQTAGAG VWLSGRNSLT DKGMARVAEY
PQYAMDGRWV LEGHGVTPDI EVDNLPFATF NGHDAQLETA ISYLKDELIK QPIPALKAQP
MPAKGMAEDI KAK
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