Gene Shewana3_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1141 
Symbol 
ID4477854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1346293 
End bp1347576 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content50% 
IMG OID639725692 
Productthreonine synthase 
Protein accessionYP_868782 
Protein GI117919590 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.212689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTAT ATAATTTAAA ACACCCTTCG CAGAAAGTGA GCTTTAAGGA AGCGGTGCAA 
TTAGGACTCG GTAAAGACAG AGGGCTGTTT TTTCCTACTC AAATCCCTGT GTTGCACGAT
ATCGAGGCGC TGCTGGCGAT GCCTTTTGTC GAGCGCAGTA AAAAAGTACT CGGCGCTTGG
CTTGCCTCAG AGCTTGGGCA AGACGCGGTA GATAAACTGG TCGAGCGTGC CTTTAATTTC
GATTTGCCCT TGGTGGCGGT CGATGAGCAG CGCTCGTGCC TCGAGCTTTT CCATGGGCCA
ACTTTAGCAT TCAAGGATTT TGGTGCGCGC TTTATGGCGC AATGCATCAA TGCCTTTGCT
CAAGACTCGC GCTTAACCAT TCTAACCGCG ACCTCGGGTG ACACTGGGGC GGCGGTGGCC
GATGCCTTTT ACGGCCTAGA TAAAGTCAAT GTCGTCGTGC TCTATCCTAA GGGCAAAATC
AGTGAGCTAC AGGAAAAGAT GTTCACCACC TTAGGTAAGA ACATTCACAC TGTGGCAGTA
GCGTCCGATT TCGATGCTTG CCAGCACTTA GTCAAACAGG CTTTTGAAGA TAGCGATGTG
CGTGATGGCT TGCATTTAAA CTCGGCCAAC TCAATCAATA TCAGTCGTTT GCTGGCACAG
ATTTGTTATT ACTTCGAAGC GGTCGCCCAA TCGAAACAGC GCCATGAGGC CGATCCTGTG
ATTGCTGTGC CCAGTGGTAA TTTTGGTAAT CTCACCGCGG GCTTGTTTGC CAAAGCCATG
GGCTTACCTG TTAAACGTTT TATTGCCGCG ACCAACGCCA ATGACACTGT CCCACGTTAT
TTAGAGAGTG GTGATTGGCA GCCTAATCCT ACTCAAGCGA CTATGTCCAA TGCGATGGAT
GTGAGCGAGC CAAGTAACTG GCCGCGCGTC GAGGCAATTT GCGAGAAACT CGGTTGGCCA
TTGGCGGACC TAGTGGGGAT TCGTTTATCA GAGGCGCAAA CCTCGGAGGC GCTGGCGGAG
TTACATGCAA AAGGTTATGT GTCCGAACCC CATGCAGCGA TTGCTGCCAG AGCCTTAACG
CTTAACTTAG TGCCTGATGA AGTGGGGATA TTTTTAGGTA CAGCACATCC TGCCAAGTTT
AAGGACGTCG TAGATAGAGA GCTTAACCTC GATTTACCTC TGCCTGCAGA ACTTAAAGCG
GTGGAGCATA AACCCATACT CTCGGCTGAA TTAGCCGCCG ATTTTGCTCA GTTAAAGTCA
CATTTATTTG CGGTGTTAAG CTGA
 
Protein sequence
MELYNLKHPS QKVSFKEAVQ LGLGKDRGLF FPTQIPVLHD IEALLAMPFV ERSKKVLGAW 
LASELGQDAV DKLVERAFNF DLPLVAVDEQ RSCLELFHGP TLAFKDFGAR FMAQCINAFA
QDSRLTILTA TSGDTGAAVA DAFYGLDKVN VVVLYPKGKI SELQEKMFTT LGKNIHTVAV
ASDFDACQHL VKQAFEDSDV RDGLHLNSAN SINISRLLAQ ICYYFEAVAQ SKQRHEADPV
IAVPSGNFGN LTAGLFAKAM GLPVKRFIAA TNANDTVPRY LESGDWQPNP TQATMSNAMD
VSEPSNWPRV EAICEKLGWP LADLVGIRLS EAQTSEALAE LHAKGYVSEP HAAIAARALT
LNLVPDEVGI FLGTAHPAKF KDVVDRELNL DLPLPAELKA VEHKPILSAE LAADFAQLKS
HLFAVLS