Gene Shewana3_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1138 
Symbol 
ID4477851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1341513 
End bp1342181 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content50% 
IMG OID639725689 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_868779 
Protein GI117919587 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000112124 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CCCAACACAG CGCGGTAACC ATTCATTACC GTTTATCAGA TCAAGACGGC 
AGACTTTTAG AAGACTCTTT TGATGCCGAA CCTATGCTCT ATCTGCACGG TGCAGAAAAC
CTGATCCCAG GATTAGAAGC TGCATTAGAA GGTAAAACCA AGGGCGAAAC ACTGGATGTG
ACTATTAGTG CCGAAGAAGC CTACGGTCCT TACCACGATG GTCTGCGTCA AGCTGTGCCA
TTAGAAGCAT TCGGTGATAT CGAAGATATC GTTCCTGGTA TGCGCTTTAT TGCCGAGACA
GAAATGGGTC AACGCCCAGT GCAAGTTGTC GAAGTCAAAG ATGATGTGGT CATCGTTGAT
GGCAACCATC CTTTAGCGGG ACAAGCACTG AGCTTCAACA TTGAAATTAT CGATGTTCGC
GCTGCAACTG CAGAAGAAGT TGCCCATGGC CATATCCATG CCCACGGCGG ATGTGGTAGC
CATGGACACA GCCATGATCA TGACCACGGC GGCGGATGCT GTGGTGGTTC AAGCCAAGAT
GCGGGTGGCT GTTGTGGCGG TTCTGATGAT CATGGTCATC ATCACCATGA CCATGATCAC
GATCATGAAG CATGCGACAC ACCAAAAACA GGTTGTGATG GCAATGGCGG TTGCGGTTGC
CGCGGCTAA
 
Protein sequence
MKITQHSAVT IHYRLSDQDG RLLEDSFDAE PMLYLHGAEN LIPGLEAALE GKTKGETLDV 
TISAEEAYGP YHDGLRQAVP LEAFGDIEDI VPGMRFIAET EMGQRPVQVV EVKDDVVIVD
GNHPLAGQAL SFNIEIIDVR AATAEEVAHG HIHAHGGCGS HGHSHDHDHG GGCCGGSSQD
AGGCCGGSDD HGHHHHDHDH DHEACDTPKT GCDGNGGCGC RG