Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1090 |
Symbol | |
ID | 4476425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1283202 |
End bp | 1284101 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725633 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_868731 |
Protein GI | 117919539 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACTAT TGAATAACCT CAGCTTAGCC AGCTTCAAAC CCCAATTCGC CGCTGCAATG TTGGTGGCAG GAATGGCTAC GGCGCAGGCC GCACCTTTGC AAGTGAGCCA TTTTAATCCG GGTGAAAACA GCATCTTTGC CGTGTCCTCC AGCTTTATCA GTGGCGAGCA TGAAATGATG TTGGTCGATG CTCAGTTCCA AAAAAATGAT GCCCAGACCT TAGTGAATAC CATTAAGGCC AGCGGTAAAA AACTCACCTT GGTTTATATC AGCCACAGCG ATCCTGACTT TTACTTTGGG TTGGATGTGA TTAAGCAAAA CTTTCCCGAG GTAGAAATCG TCGCCACCCA AACCACGGTC GATGATATTA AAGCCTCGAT GGAGGGCAAA CTCGCCTACT GGGGACCGAT TTTAAAGGAC AATGCGCCGA GCCAATTAGT GTTGCCAAAG GTGGTGACAA CCAATAGCTT TAGTATCGAC GGCGAACAAG TGCTGATTGA AGGTCTAGAG GATGCTCATC CTAAGCATAC TTTCCTGTGG GTACCTTCGG CTAAGACCAT CACTGGCGGA GTTGAAGTAT TTGATAATAC CCATGTTTGG ATAGCTGATA CCCAAAGTAT CGAGTCTCGC CAGGCTTGGT TAGCCCATTT AGATAAAATG AGCGCCCTCT CCCCCGAAAC AGTGATCCCT GGCCATTATC TTGGCAAAGC GAGATTTGAT CAGCGCGCGA TTAGCTTTAC CCGCGACTAT ATTCATGCCT TTGAAAATGC GGCTAAAACA GCAAAAAATT CTGCGGACTT AATCGCCAAG ATGCTCGCAC TCTACCCACA AATCCCCAGC GATGTGGGCC TTGAGATCAG CGCCAAAGTG ATTATGGGTG AAATGCGCTG GCCCATGTAA
|
Protein sequence | MTLLNNLSLA SFKPQFAAAM LVAGMATAQA APLQVSHFNP GENSIFAVSS SFISGEHEMM LVDAQFQKND AQTLVNTIKA SGKKLTLVYI SHSDPDFYFG LDVIKQNFPE VEIVATQTTV DDIKASMEGK LAYWGPILKD NAPSQLVLPK VVTTNSFSID GEQVLIEGLE DAHPKHTFLW VPSAKTITGG VEVFDNTHVW IADTQSIESR QAWLAHLDKM SALSPETVIP GHYLGKARFD QRAISFTRDY IHAFENAAKT AKNSADLIAK MLALYPQIPS DVGLEISAKV IMGEMRWPM
|
| |