| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1056 |
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| Symbol | |
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| ID | 4476602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1238687 |
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| End bp | 1239865 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639725599 |
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| Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
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| Protein accession | YP_868697 |
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| Protein GI | 117919505 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGT TAATCAACCT CTGGCGCACA CTAAACAAAC CCACAAAAGC TCTCACCTTA
GGCGCTGTCA GCATCAGTGC TTTTATCATG GGCATCATCT TCTGGGGCGG ATTTAACACC
GCACTGGAAG CCACCAACAC CGAAGCCTTC TGTATTAGCT GCCACAGTAT GGAAAGCAAG
CCTTACCAAG AGTTGCAGGA AACTGTGCAT TGGTCGAATC ACTCTGGCGT GCGCGCCACC
TGCCCCGACT GTCACGTGCC CCACAACTGG AGCCGTAAGA TTGCCCGTAA GATGGAAGCT
TCCCACGATG TCTGGGGCTG GTTATTCAAC ACGGTCAACA CCCCTGAAAA ATTTGAAGCT
AAACGCCTCG AAATGGCGAG CCGCGAATGG AAACGTTTCG ATCGCGACAA TTCTCTGGCC
TGTAAAAACT GCCACAACTA CAACTCGATC AAGTGGGAAA GCATGTCACC ACTGGCGCAA
AAACAGATGA AACGCGCCGC CGAAATCGAC CAAAGCTGTA TCGATTGCCA CAAAGGCATT
GCCCACCATT TACCTGAAAT GGGCACGGCC CGCGCACCCG AACTCATCGC CGAAGTCGGC
GCTGGCGTCA GCTCAGTCGA AACCAACCAA ACCTACTACA GCGCCCTGAC TAAGCCACTG
TTCTTTAGTG AAAAAGGTGA CGTTGAAGCC GGTACTTTAA ACGTTGCGAC TAAAGTAAAA
GTGCTCGAAA CCCAAGGTAA GCGTATCAAA ATTGGTATCG ATGGCTGGCG TAAGAAAATC
GGCGCAGGCC GCGTGATCTA CATGGACTTT GGCGTAAACA TTCTGTCGGC GCAGTTAAGC
AAAGATGCAG CCGAAACCGA AGGTGTTATC CAAACCTTTG AAGAGAAAGA AGACCCAATG
ACAGGCCTGA AATGGCAACG GGTAGAAGCC CAAATCTGGA CCGATAAGGA TTACCTGCTC
ACCGAGCTGC AACCACTCTG GGGCTATGCC CGCGACACGT TCCGCTCAAG CTGTAGTGTG
TGCCACACCC AGCCAGATGA AGCGCATTTC GATGCCAATA CCTGGCCAGG CATGTTCCAA
GGCATGTTGG CCTTCGTGAA CATGGACCAA GACACCCAAG CGCTGGTGCA GAAATACCTG
CAGGAACATT CGTCAACCTT CGTGAAAAAA GAGCACTAA
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| Protein sequence | MKWLINLWRT LNKPTKALTL GAVSISAFIM GIIFWGGFNT ALEATNTEAF CISCHSMESK
PYQELQETVH WSNHSGVRAT CPDCHVPHNW SRKIARKMEA SHDVWGWLFN TVNTPEKFEA
KRLEMASREW KRFDRDNSLA CKNCHNYNSI KWESMSPLAQ KQMKRAAEID QSCIDCHKGI
AHHLPEMGTA RAPELIAEVG AGVSSVETNQ TYYSALTKPL FFSEKGDVEA GTLNVATKVK
VLETQGKRIK IGIDGWRKKI GAGRVIYMDF GVNILSAQLS KDAAETEGVI QTFEEKEDPM
TGLKWQRVEA QIWTDKDYLL TELQPLWGYA RDTFRSSCSV CHTQPDEAHF DANTWPGMFQ
GMLAFVNMDQ DTQALVQKYL QEHSSTFVKK EH
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