Gene Shewana3_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1046 
Symbol 
ID4479391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1223734 
End bp1224726 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content53% 
IMG OID639725589 
Productphosphoserine phosphatase 
Protein accessionYP_868687 
Protein GI117919495 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00163618 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAGCT TGAACCAAAA TGCGCTGTTT GTATGGTTAG CTGCTAGCCC TTCACCTCGC 
TTTGAATATC AGGGGCTCAG TTTCGAGACT TATCAGGAAT CGTCTACGCG GCCATCCCAG
AGCGGATTTG CTATGCGTCT GATTTACGAA GATTTAAGCA TTGAAGACTC ATTAGCGGCT
TGGATTGTTT CTCTGGCTAA AAGCCTTAAA TTAACTTCGC TCTCCATCGC ACCTATTCGC
CGTCAAGTCG CGCTGCATTG TGTTGAATTA GCGCTTCCCG TGGAGCCGAG TGCCGAGTTG
TTAGCCACTT GTCCATCACT GGTGGAGTTA CACCTTATTC GCGGCCCATT ACCTAAACTG
AGCGAGCCCG GTTTACTGGT GATGGACATG GATTCTACCG CGATCCAAAT TGAATGTATC
GACGAACTTG CCGCTATGGC AGGGGTCGGC GAGCAAGTGG CGGCAATCAC AGAGCGCGCC
ATGCAAGGCG AGCTCGATTT CGAGCAGAGT TTGCGCCAAA GGGTTGCCCA ACTTCAGGGC
GCCGATGCCA AGATTATTCA AACCTTGTGT GACACTTTGC CACTGATGCC GGGCCTTGAG
GCCATGCTGA CCGAGCTTAA GTCGCACCAT TGGCGTTTGG TTGTCGCGTC AGGCGGTTTC
ACGCCGTTTG TAGGTCACTT AAAACAGCTG CTGAATTTAG ACGCGGCCTT TGCCAATGAA
TTAGTGATTG CGGACGGTAA GCTTGCGGGA ACCGTCACGG GGAAAGTCGT CGATGCCCAG
TTTAAGGCCT ATGTGGTTAA CCGTTGTAGC CAAGACTGGC AGATCCCTGC TGGGCAGCGT
GTCGCCATCG GTGACGGTGC CAACGATATC CCTATGGTTC AGGCGGCGGA CTTTGGGATT
GCCTTCCATG CCAAGCCTAA ACTTGCGGCA GCGGCGGATG CGCGGATCCG CAGTTTAGAT
CTGCGTGTAT TGCCTTATCT GCTGCAGTTT TAA
 
Protein sequence
MESLNQNALF VWLAASPSPR FEYQGLSFET YQESSTRPSQ SGFAMRLIYE DLSIEDSLAA 
WIVSLAKSLK LTSLSIAPIR RQVALHCVEL ALPVEPSAEL LATCPSLVEL HLIRGPLPKL
SEPGLLVMDM DSTAIQIECI DELAAMAGVG EQVAAITERA MQGELDFEQS LRQRVAQLQG
ADAKIIQTLC DTLPLMPGLE AMLTELKSHH WRLVVASGGF TPFVGHLKQL LNLDAAFANE
LVIADGKLAG TVTGKVVDAQ FKAYVVNRCS QDWQIPAGQR VAIGDGANDI PMVQAADFGI
AFHAKPKLAA AADARIRSLD LRVLPYLLQF