| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1037 |
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| Symbol | prfC |
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| ID | 4479382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1212358 |
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| End bp | 1213938 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725580 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_868678 |
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| Protein GI | 117919486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00294724 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000176372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCAGACA ATAAAGTAGA GGTCGATAAA CGTCGCACCT TCGCGATTAT ATCGCACCCC
GACGCGGGTA AAACCACCAT TACCGAAAAA GTGCTGTTAT TCGGAAACGC GCTGCAGAAA
GCGGGTACCG TTAAGGGCAA AAAATCGGGT CAGCATGCTA AGTCTGACTG GATGGAAATG
GAAAAAGACC GTGGTATTTC GATTACTACG TCTGTCATGC AGTTCCCCTA TGGTGGCGCG
CTCGTTAACC TACTCGATAC TCCCGGCCAC GAAGACTTCT CAGAAGATAC TTACCGCACC
TTGACGGCGG TTGACTCTTG CTTGATGGTT ATCGACTCGG CAAAAGGGGT AGAGGATCGT
ACCATCAAAT TGATGGAAGT CACGCGTCTG CGCGATACGC CTATCGTCAC CTTTATGAAC
AAACTCGACC GTGATATTCG CGATCCCATC GAACTGATGG ATGAGGTTGA AGATGTTCTT
AATATCGCCT GTGCGCCTAT CACTTGGCCT ATTGGCAGCG GTAAAGAGTT CAAAGGTGTT
TACCATATTC TGCGTGATGA AGTGGTACTG TATCAGAGCG GTATGGGACA CACGATTCAA
GAGCGCCGCG TGATTGAAGG CATCGATAAC CCTGAGCTGG ATAAGGCGAT TGGTAGTTAT
GCTGCCGATT TACGTGATGA AATGGAGTTG GTTCGCGGTG CATCGAATGA ATTTGATCAT
CAAGCCTTCT TAAAGGGTGA ACTTACGCCA GTCTTCTTCG GTACTGCATT GGGTAACTTC
GGTGTTGACC ATATCCTCGA TGGTATTGTG GAGTGGGCGC CAAAGCCGTT GCCTCGTGAA
AGCGATGCGC GGATGATCAT GCCTGACGAA GAAAAATTCA CCGGTTTTGT GTTTAAAATC
CAAGCTAACA TGGATCCTAA ACACCGTGAC CGCGTTGCCT TTATGCGCGT TTGCTCGGGT
CGCTATGAGC AAGGCATGAA GATGCACCAT GTGCGCATTG GCAAAGATGT TAACGTCAGT
GATGCCTTGA CCTTTATGGC GGGTGACCGA GAACGTGCTG AAGTGGCGTA TCCTGGTGAT
ATTATTGGTT TACATAACCA TGGGACCATT CGTATTGGTG ATACTTTCAC CCAAGGTGAA
AAGTTCCGCT TTACCGGTGT ACCTAACTTC GCACCTGAAA TGTTCCGCCG TATTCGTCTG
CGTGATCCAC TCAAGCAAAA ACAATTGCTT AAGGGCCTAG TTCAGTTGTC TGAAGAAGGT
GCTGTGCAGG TATTCCGTCC ATTAGATTCG AACGATTTGA TCGTTGGGGC TGTGGGTGTG
CTGCAGTTTG AAGTGGTTGT CGGCCGCTTA AAGAGCGAGT ACAACGTTGA AGCGATTTAC
GAAGGTATTA GCGTTTCAAC GGCACGCTGG GTTTATTGTA AAGATGAGCG TAAGCTAGAA
GAGTTCCGCC GTAAGTGCAG CCAAAACTTG GCGCTCGATG GTGGCGATAA CTTAACTTAT
ATTGCGCCAA CTATGGTTAA CTTAAATCTT TCGATGGAAA GATACCCTGA TATCGAGTTC
GCTAAAACGC GCGAACACTA A
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| Protein sequence | MSDNKVEVDK RRTFAIISHP DAGKTTITEK VLLFGNALQK AGTVKGKKSG QHAKSDWMEM
EKDRGISITT SVMQFPYGGA LVNLLDTPGH EDFSEDTYRT LTAVDSCLMV IDSAKGVEDR
TIKLMEVTRL RDTPIVTFMN KLDRDIRDPI ELMDEVEDVL NIACAPITWP IGSGKEFKGV
YHILRDEVVL YQSGMGHTIQ ERRVIEGIDN PELDKAIGSY AADLRDEMEL VRGASNEFDH
QAFLKGELTP VFFGTALGNF GVDHILDGIV EWAPKPLPRE SDARMIMPDE EKFTGFVFKI
QANMDPKHRD RVAFMRVCSG RYEQGMKMHH VRIGKDVNVS DALTFMAGDR ERAEVAYPGD
IIGLHNHGTI RIGDTFTQGE KFRFTGVPNF APEMFRRIRL RDPLKQKQLL KGLVQLSEEG
AVQVFRPLDS NDLIVGAVGV LQFEVVVGRL KSEYNVEAIY EGISVSTARW VYCKDERKLE
EFRRKCSQNL ALDGGDNLTY IAPTMVNLNL SMERYPDIEF AKTREH
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