Gene Shewana3_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1028 
Symbol 
ID4479373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1200204 
End bp1200659 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content47% 
IMG OID639725571 
Producthypothetical protein 
Protein accessionYP_868669 
Protein GI117919477 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0162582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000040041 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCAACAT TAGAATCCAG ACTGGCAGAC ATGCTCAAAG TGCCTGTGGA GGCATTAGGC 
TTCCAACTTT GGGGCATTGA ATATGTACAA GCGGGTAAAC ATTCAATCCT GCGCGTGTTC
ATTGATGGTG AGAATGGTAT CAATATCGAA GATTGTGCCA ACGTAAGTCG CCAAGTCAGC
GCTGTACTCG ATGTTGAAGA CCCTATTTCG ACCGAATATA CCTTAGAGGT TTCTTCACCC
GGTGTAGATA GACCGCTGTT CACTGCTGAA CAATATGCGG CCTACGTCGG TGAGGATGTC
AAGCTTCAAC TGACTATGCC TGTCGCGGGC AGTCGTAATT TAAAAGGCGC CATTACACAG
GTTGACGGCC AAATGCTGTC ACTCAATGTG AATGGTAAAG AGCTGGTTGT CGCCTTGGAT
AATATCCGTA AAGGCAACAT CATCGCTAAG TTTTGA
 
Protein sequence
MATLESRLAD MLKVPVEALG FQLWGIEYVQ AGKHSILRVF IDGENGINIE DCANVSRQVS 
AVLDVEDPIS TEYTLEVSSP GVDRPLFTAE QYAAYVGEDV KLQLTMPVAG SRNLKGAITQ
VDGQMLSLNV NGKELVVALD NIRKGNIIAK F