Gene Shewana3_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1026 
Symbol 
ID4479369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1198659 
End bp1199441 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content48% 
IMG OID639725567 
Producttriosephosphate isomerase 
Protein accessionYP_868667 
Protein GI117919475 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.72651e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.21404e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACTCA GACGTCCTAT GGTAGCTGGC AATTGGAAGA TGAACGGCAG CGCGGCATTA 
GCCCAAGAGT TGTTCAAGAA ATTTGCCTCA AAGCTCCAAA ATGATTCAGC TGAAGTGGTT
TTATGCCCGC CTTCTATCTA TCTAGAAAGC GTAAGGCAAC TGCTAGAAGC AAACAAGGAA
GCGTTAGACG GTTCACTTGT TAGGATGGGC GCTCAGAATT TAAGTCAACA TGACTTTGGC
GCTTATACCG GAGAAGTTTC GGGTCAGATG CTTAAAGATT GCGGATGTCG ATATGTCATT
ATCGGGCATT CAGAACGTCG CCGTATGTAC GGAGAGACGA GTAATATCGT AGCGGAGAAA
TTCGCTGCAG CACAAAAGCA CGGTTTAACC CCCATTTTAT GCGTGGGTGA GTCGGGTCCA
GCACGTGAAG CAAGACGTAC CTTCGAGGTG ATTGCGGAAG AGTTGGATAT AGTGATCCAG
AAAAATGGCA CTATGGCTTT TGATAACGCC ATTATCGCTT ACGAGCCGTT ATGGGCGGTA
GGGACTGGTA AGAGCGCGAC ACCAGAGCAG GCACAAGAAG TACATGCGTT TATACGCAAG
CGTCTCTCTG AAGTGTCTCC GTTTATCGGA GAAAATATCA GGATTTTGTA CGGTGGCAGT
GTGACACCGA GTAATGCGGC AGATTTATTT GCCCAACCTG ATGTTGATGG TGGACTGATT
GGCGGTGCCA GTTTAAACTC TACCGAGTTT TTAAGTCTGT GTACCATAGC GATGAGCGCA
TAA
 
Protein sequence
MALRRPMVAG NWKMNGSAAL AQELFKKFAS KLQNDSAEVV LCPPSIYLES VRQLLEANKE 
ALDGSLVRMG AQNLSQHDFG AYTGEVSGQM LKDCGCRYVI IGHSERRRMY GETSNIVAEK
FAAAQKHGLT PILCVGESGP AREARRTFEV IAEELDIVIQ KNGTMAFDNA IIAYEPLWAV
GTGKSATPEQ AQEVHAFIRK RLSEVSPFIG ENIRILYGGS VTPSNAADLF AQPDVDGGLI
GGASLNSTEF LSLCTIAMSA