Gene Shewana3_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1024 
Symbol 
ID4479367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1196220 
End bp1197053 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content51% 
IMG OID639725565 
Productdihydropteroate synthase 
Protein accessionYP_868665 
Protein GI117919473 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0113899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000441656 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTTGAAT TAATTGCTGG AACCAAACGC TTATCCTTAG CCTCGCCCGT CGTGATGGGC 
ATTCTGAATG TTACTCCCGA TTCTTTTTCC GATGGTGGAA AGTTCTCTTC CTTTGAATTA
GCTTGCCAAC ATGCCGATGA GATGGTCGCC CAAGGGGCGC TTATCATCGA TATCGGTGGC
GAGTCGACAA GACCGGGCGC GGCCGATGTG TCGGTTCAAG ATGAACTCGC ACGGGTGATC
CCTTTGGTGG AATATGTCGC GAAACACCAT GATGTGTGGA TTTCGGTCGA TACCAGTAAA
CCGGAAGTGA TGCGACAAGC GGTGAATGCT GGCGCCCATT TAATCAACGA TGTGCGTGCC
TTGTTGGAGC CTGGGGCTTT AGAGACTGCG GCGCAGCTAA ATGTGCCCAT CTGTTTGATG
CACATGCAGG GCGCACCGCG CAGTATGCAA ACGGCGCCCG AATACCAAGA CCTTGTTGCC
GATGTTTCTG AGTTTTTGTA CGAGCGTATT CAAGCCTGCA TCGATGCGGG GATCCCGCGG
GAGCGATTGT TAATCGACCC GGGTTTTGGC TTTGGTAAAA CCTTAGAACA CAACTATGAA
CTGCTGGCGA AGTTAGATAG TTTTGAGCAG TTTGAACTGC CGATATTGAT AGGTTTATCC
CGTAAGAGCA TGATAGGAAA CCTCCTTGCT AGACCGACCT CCGAGCGTTT AGCGGGGAGC
CTTGCTGGCG CCATGATAGC GGCCCAGAAA GGGGCACATA TCATTCGTGT CCATGATGTC
CCTGAAACTG TCGATATGCT GAAAGTGTTA CAAGCGACAC AGGCATATCT ATAA
 
Protein sequence
MFELIAGTKR LSLASPVVMG ILNVTPDSFS DGGKFSSFEL ACQHADEMVA QGALIIDIGG 
ESTRPGAADV SVQDELARVI PLVEYVAKHH DVWISVDTSK PEVMRQAVNA GAHLINDVRA
LLEPGALETA AQLNVPICLM HMQGAPRSMQ TAPEYQDLVA DVSEFLYERI QACIDAGIPR
ERLLIDPGFG FGKTLEHNYE LLAKLDSFEQ FELPILIGLS RKSMIGNLLA RPTSERLAGS
LAGAMIAAQK GAHIIRVHDV PETVDMLKVL QATQAYL