Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1017 |
Symbol | |
ID | 4479360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1188536 |
End bp | 1189012 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639725558 |
Product | transcription elongation factor GreA |
Protein accession | YP_868658 |
Protein GI | 117919466 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.250708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00044331 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTAAGG TTCCTATGAC AGTTGTCGGT GCAGAACAGC TGCGTAAAGA GTTAGATATG CTCAAGTTTG AACGTCGCCC GAAAATCACT GAAGCGATTG CCTCAGCGAG AGAGTTAGGC GATCTAAAGG AAAACGCGGA ATATCATGCA GCCCGTGAAG AGCAAGGGAT CTGTGAAGCG CGTATTCGTG ACATTGAAGG CAAACTTTCT AACGCGCAGA TCATCGACGT GACTAAGATG GCGAACAATG GTCGTATCAT TTTTGGTACC ACTGTGACTA TCCTCAATCT GGATACCGAT GCGGAAGTGA CTTACCGTAT CGTGGGCGAC GATGAAGCTA ACATCAAAGA AAACCTGATT TCAGTTAATT CTCCGATTGC CCGTGGTTTA GTGGGCAAGA ATGAAGGTGA TGAAGTGTCG ATCGCAACCC CAGGTGGTTT GACCGATTAC GAAATTATTT CGGTGCAATA CATCTAA
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Protein sequence | MTKVPMTVVG AEQLRKELDM LKFERRPKIT EAIASARELG DLKENAEYHA AREEQGICEA RIRDIEGKLS NAQIIDVTKM ANNGRIIFGT TVTILNLDTD AEVTYRIVGD DEANIKENLI SVNSPIARGL VGKNEGDEVS IATPGGLTDY EIISVQYI
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