| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1008 |
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| Symbol | |
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| ID | 4477536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1178510 |
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| End bp | 1179934 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725542 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_868649 |
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| Protein GI | 117919457 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.132109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0977371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA AACTCCATAT TAAAACTTGG GGCTGTCAAA TGAATGAGTA TGACTCATCC
AAGATGGCGG ATCTTTTAGG CGAATACCAA GGTTACACCT TGACTGAAGA AGCAGAAGAA
GCGGACATTC TACTGCTGAA CACTTGTTCT ATCCGCGAAA AAGCGCAGGA AAAAGTGTTC
CATCAGTTAG GTCGTTGGAA AACCCTTAAA GATAAAAATC CCGATCTGAT CATTGGTGTG
GGTGGTTGTG TTGCATCGCA GGAAGGTAAA GCGATCAAAG ACCGTGCTCA GTGCGTCGAC
ATCATCTTTG GACCACAGAC ACTACACCGT CTGCCAGATA TGATCGACCA AGTACGCCGT
GGCGAAAAGG CCGTGATCGA CGTTAGCTTC CCTGAAATCG AGAAATTTGA CCGTCTACCA
GAACCGCGCG CCGAAGGCCC AACGGCGTTT GTGTCTATCA TGGAAGGTTG CAGCAAGTAC
TGTTCATTCT GCGTGGTGCC TTATACCCGT GGTGAAGAAG TCAGCCGTCC ATCGGACGAT
ATCATCCTCG AGATTGCCCA ACTGGCAGAA CAAGGTGTGC GCGAAGTCAA CCTGCTCGGT
CAAAACGTTA ACGCCTACCG TGGTGCAACC CACGACGGCG GCATTTGTAC CTTTGCCGAG
CTATTACGCT ATGTTGCCGC TATCGATGGT ATCGACCGTA TTCGCTTCAC CACCAGTCAC
CCGATTGAAT TTACGCAGGA CATTATCGAC GTTTACGAAG ATACTCCTGA ATTAGTCAGC
TTCCTGCACT TACCAGTGCA ATCGGGTTCT GACCGCATTC TGACGGCAAT GAAGCGTGGC
CATATGGCGA TAGAGTACAA GTCAATCATC CGCCGTCTGC GCAAAGCCCG TCCTGATATC
CAAATCAGCT CTGACTTTAT CATTGGCTTC CCTGGCGAAA CCAAAGAAGA CTTCGCCGAT
ACCATGAAGC TGATTGAAGA TGTGGCGTTT GACCACAGCT TTAGCTTTAT CTACAGTGCG
CGCCCTGGTA CACCTGCGGC AGATTTACCC GATGACGTTG ATATGGAAGA GAAAAAACAA
CGTCTGGCGA TTCTGCAGGA CCGTATCACT CAACAAGCCA TGCGTTACAG CCGCCATATG
ATGGGCACAG TACAACGTAT TCTGGTTGAA GGCCCATCGG TGAAAAACCC TATGGAGCTG
CGCGGCCGTA CCGAAAACAA CCGTGTCGTC AACTTCGAAG GTCAGCCAAA GCACATCGGT
AGCTTTGTGG ATGTCGAAAT TGTTGACGTT TACACTAACT CACTGCGCGG TAAATTTATC
CGTGGTGAAG ATGAAATGGA TCTGCGCCGC AACCTGCGCC CATCGGATAT TCTGGCCAAA
CACAAACAGG ATGACGATCT CGGTGTGACA CAATTTAAAC CTTAA
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| Protein sequence | MSKKLHIKTW GCQMNEYDSS KMADLLGEYQ GYTLTEEAEE ADILLLNTCS IREKAQEKVF
HQLGRWKTLK DKNPDLIIGV GGCVASQEGK AIKDRAQCVD IIFGPQTLHR LPDMIDQVRR
GEKAVIDVSF PEIEKFDRLP EPRAEGPTAF VSIMEGCSKY CSFCVVPYTR GEEVSRPSDD
IILEIAQLAE QGVREVNLLG QNVNAYRGAT HDGGICTFAE LLRYVAAIDG IDRIRFTTSH
PIEFTQDIID VYEDTPELVS FLHLPVQSGS DRILTAMKRG HMAIEYKSII RRLRKARPDI
QISSDFIIGF PGETKEDFAD TMKLIEDVAF DHSFSFIYSA RPGTPAADLP DDVDMEEKKQ
RLAILQDRIT QQAMRYSRHM MGTVQRILVE GPSVKNPMEL RGRTENNRVV NFEGQPKHIG
SFVDVEIVDV YTNSLRGKFI RGEDEMDLRR NLRPSDILAK HKQDDDLGVT QFKP
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