Gene Shewana3_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1007 
Symbol 
ID4477535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1177182 
End bp1178246 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content50% 
IMG OID639725541 
ProductPhoH family protein 
Protein accessionYP_868648 
Protein GI117919456 
COG category[T] Signal transduction mechanisms 
COG ID[COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.109119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0769537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCAGTA AATTAACCAC AATGAATCTG TATCTCGAAC CCGCAGAAAC CCGCCGTTTG 
GCCTCGCTGT GCGGTCCCTT CGATGACAAT ATCAAACAGA TTGAGCGTCG CGTTGGCGTT
GAGATAGTCC GTAAGAACAA CCATTTTCAA ATTACCGGAC TGCCGCGTAA CTGTTTAAGT
GCCAATAACT TACTTAAGCA GCTCTATATC GAGACCCAAA CGGTCAAGGG CAGCACGCCG
GATCTCGACC CTGAGCAGGT GCATTTGGCA ATTCAAGAAG CCATAGCCCT CGAACAGGAC
GACAGCGGTG ACGATAAATC TTTATTTATC AAAACCCGCC GTGGTGTGAT TAAACCGCGT
AACCCCAACC AAAGCACCTA TGTGGCCAAC ATTGTGCGCC ATGATATTAC CTTTGGTATT
GGCCCAGCGG GAACGGGTAA AACCTACTTA GCAGTGGCCG CCGCAGTAGA TGCATTAGAG
CGTCAAGAAG TGCGCCGTAT TCTGCTCACC CGCCCTGCGG TTGAAGCAGG GGAAAAACTC
GGCTTCTTAC CCGGCGATTT AAGCCAGAAA GTCGACCCTT ACCTGCGCCC ACTTTATGAT
GCCTTGTTCG AAATGCTCGG CTTTGAAAAG GTGGAACGCT TAATCGAGAA AAACGTCATC
GAAGTGGCGC CGCTCGCCTA TATGCGTGGT CGCACCCTAA ACGATGCCTT TATTATTCTC
GATGAGAGCC AAAACACCAC CGTCGAACAG ATGAAGATGT TCCTAACCCG TATTGGCTTT
AACTCACGCG CGGTGATCAC GGGGGACATC ACCCAGACAG ACTTACCCAA ACATGTTAAG
TCGGGTCTGC GCCACGCTAT TGAAGTCCTG AGCCAAGTCG AGGAAATCAG CTTTAACTTC
TTCGTGTCTC AAGACGTAGT GCGCCACCCA GTGGTTGCTC GGATTGTTGA AGCCTATGAT
GCTTACGATC GTAAGGAGCA GGCATTAAAG GCTGAAAAAG AGCGCCGCGA CTATCAACAA
GCGCATCCAC AAACGCAACA GGAAGTCTTA AAGCATGAGT CTTGA
 
Protein sequence
MSSKLTTMNL YLEPAETRRL ASLCGPFDDN IKQIERRVGV EIVRKNNHFQ ITGLPRNCLS 
ANNLLKQLYI ETQTVKGSTP DLDPEQVHLA IQEAIALEQD DSGDDKSLFI KTRRGVIKPR
NPNQSTYVAN IVRHDITFGI GPAGTGKTYL AVAAAVDALE RQEVRRILLT RPAVEAGEKL
GFLPGDLSQK VDPYLRPLYD ALFEMLGFEK VERLIEKNVI EVAPLAYMRG RTLNDAFIIL
DESQNTTVEQ MKMFLTRIGF NSRAVITGDI TQTDLPKHVK SGLRHAIEVL SQVEEISFNF
FVSQDVVRHP VVARIVEAYD AYDRKEQALK AEKERRDYQQ AHPQTQQEVL KHES