Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1001 |
Symbol | leuS |
ID | 4477529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1170450 |
End bp | 1173029 |
Gene Length | 2580 bp |
Protein Length | 859 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725535 |
Product | leucyl-tRNA synthetase |
Protein accession | YP_868642 |
Protein GI | 117919450 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0495] Leucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.355839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.124376 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGC AATATAATCC CTCAGAAATT GAAGCCTTAG TGCAAAAGCA CTGGCACGAC AACAAAACCT TTGAAGTTAC TGAAGATGCG AACAAAGAAA AGTTTTATTG CCTTTCGATG TTCCCCTATC CTTCAGGTCG ACTCCACATG GGACACGTTC GCAACTATAC CATAGGCGAT GTGGTTGCCC GCTTCCAGCG TCTTCAAGGC AAAAACGTGC TACAACCTAT CGGTTGGGAC TCTTTCGGTT TGCCTGCAGA AAACGCCGCA ATCAACAACA AAACAGCCCC AGCACCATGG ACTTATCAAA ATATTGAGTA CATGAAGAAT CAGCTAAAAC TGTTAGGTTT TGGCTATGAC TGGAGCCGTG AAATCGCCAC TTGTACCCCA GAATACTACC GCTGGGAACA ATGGTTCTTC ACTAAACTGT ACGAAAAAGG CTTAGTTTAC AAGAAGACAG CTTCTGTTAA CTGGTGCCCT AACGATGAAA CCGTACTGGC CAACGAGCAG GTACAAGACG GTTGCTGCTG GCGTTGTGAT ACCCCTGTAG AACAAAAAGA AATTCCACAG TGGTTCATTA AGATCACCGC CTACGCCGAA GAACTGTTAA ACGATATCGA CACCTTAGAC GGCTGGCCTG AGCAAGTTAA GACCATGCAG CGCAACTGGA TTGGTCGCAG TGAAGGCGTG GAAATGACCT TCGGTGTGGC AGGTAGCGAC AAGTCATTCG ATATCTACAC AACCCGTCCA GATACCCTGA TGGGCGTAAC CTATGTGGCT ATTGCTGCGG GTCATCCATT AGCAGAATTA GCGGCTCAAA CTAACCCAGA GCTGGCTCAA TTTATTGAAG AGTGCAAAAA CAGCACCACT TCAGAAGCCG ATTTGGCCAC CATGGAAAAA CGCGGTGTAG CAACAGGCCT TTACGCGATT CACCCCATCA CTGGCAAACA AGTGCCTATT TGGGCGGCGA ACTTTGTACT GATGAACTAC GGCACCGGCG CCGTAATGTC AGTCCCTGGC CACGACCAAC GCGATTACGA ATTTGCTAAA AAGTACAATC TGCCCATCGA AGCAGTTATC AAGCCTGTTG ATGGCGAGTT AGACATCAGC GAAGCGGCTT ACACCGAAAA AGGCGTACTG TTTAACTCTG GTGAGTTCGA CGGTTTAGAC TTTGACGGCG CCTTCAATGC CATCGCCGAC AAGTTAGTGG CTGAAGGTAA AGGCAAACGC CAAGTCAACT ATCGCCTACG CGACTGGGGT GTATCACGTC AACGTTACTG GGGCGCACCT ATTCCTATGG TGACCTTAGC CGACGGCACT GTTATTCCAA CGCCTGAAGA TCAACTGCCA GTTATTCTGC CAGAAGATGT GGTGATGGAT GGTATTCAAA GCCCAATCAA GGCCGACAAA GAATGGGCGA AAACCCAAGT TAACGGCCAA GATGCGCTGC GCGAAACCGA TACCTTCGAT ACCTTTATGG AATCTTCTTG GTATTACGCC CGTTACTGCA GCCCACAAGC AGACCAAATG TTAGATCCGA CTAAGGCTAA CTACTGGTTA CCAGTAGATC AGTATATTGG TGGTATCGAA CACGCTTGTA TGCACTTGTT ATACTTCCGC TTCTTCCACA AGTTGCTGCG TGATGCGGGT CTAGTGAACT CTAACGAGCC AGCGAAACAA CTGCTGACTC AGGGCATGGT TTTAGCCGAT GCCTTCTACT ACACCAACGA CAAAGGTGCC CGTGTATGGG TGTCTCCGCT GGATGTAGTG ACCACAGAAA AAGACGATAA AGGCCGAGTC ACCAAAGCCA TCGATAAAGA CGGTAACGAA CTGGTTTACA CCGGTATGTG CAAGATGTCT AAGTCGAAAA ACAACGGTAT CGACCCACAG GTGATGGTAG AGAAATACGG TGCCGACACA GTTCGTCTGT TTATGATGTT CGCATCACCA CCAGAATTAA CTCTGGAATG GCAAGAGTCT GGCGTTGAAG GCGCACACCG CTTTATCAAA CGTCTGTGGA AACTGGCCAG CGATTATGTG GCTCAGGACA ACAGCGAAGC CTTAGACGTT AGCAAATTAA CTAGCGAGCA AAAAGCGCTG CGCCGTGAAG TACACAAGAC CATCGCTAAG GTGACCGATG ATATCGGCCG TCGCCAGATG TTCAACACTG CGGTTGCCGC CGTGATGGAA CTGATGAACC ACCTGCAAAA AGCGCCACAA ACCACAGGTC AAGACCGAGC CATTATCGGT GAAGCTTTAA CTGCGGTAGT GCGTTTACTG TACCCAATCA TCCCACACGT GAGCTTTACC CTGTGGAACG AACTGGGCAA CACCAACAGC ATCGAAGACA GCCAATGGCC TGTTGTCGAT GAATCTGCTC TGGTAGAAGA CAGCAAACTC ATCGTGGTAC AAGTGAACGG TAAAGTGCGC GCTAAGATCA CTGTCGCTGC CGATGCTGAC CAAGCGTCAG TGGAAGCGCT GGGTATGGCG GACGAGCAAG TCATCAAGTA CTTAGATGGT GTTACGGTTC GTAAAGTTAT CTATGTACCC GGTAAACTGC TCAGCATCGT TGCCAACTAA
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Protein sequence | MQEQYNPSEI EALVQKHWHD NKTFEVTEDA NKEKFYCLSM FPYPSGRLHM GHVRNYTIGD VVARFQRLQG KNVLQPIGWD SFGLPAENAA INNKTAPAPW TYQNIEYMKN QLKLLGFGYD WSREIATCTP EYYRWEQWFF TKLYEKGLVY KKTASVNWCP NDETVLANEQ VQDGCCWRCD TPVEQKEIPQ WFIKITAYAE ELLNDIDTLD GWPEQVKTMQ RNWIGRSEGV EMTFGVAGSD KSFDIYTTRP DTLMGVTYVA IAAGHPLAEL AAQTNPELAQ FIEECKNSTT SEADLATMEK RGVATGLYAI HPITGKQVPI WAANFVLMNY GTGAVMSVPG HDQRDYEFAK KYNLPIEAVI KPVDGELDIS EAAYTEKGVL FNSGEFDGLD FDGAFNAIAD KLVAEGKGKR QVNYRLRDWG VSRQRYWGAP IPMVTLADGT VIPTPEDQLP VILPEDVVMD GIQSPIKADK EWAKTQVNGQ DALRETDTFD TFMESSWYYA RYCSPQADQM LDPTKANYWL PVDQYIGGIE HACMHLLYFR FFHKLLRDAG LVNSNEPAKQ LLTQGMVLAD AFYYTNDKGA RVWVSPLDVV TTEKDDKGRV TKAIDKDGNE LVYTGMCKMS KSKNNGIDPQ VMVEKYGADT VRLFMMFASP PELTLEWQES GVEGAHRFIK RLWKLASDYV AQDNSEALDV SKLTSEQKAL RREVHKTIAK VTDDIGRRQM FNTAVAAVME LMNHLQKAPQ TTGQDRAIIG EALTAVVRLL YPIIPHVSFT LWNELGNTNS IEDSQWPVVD ESALVEDSKL IVVQVNGKVR AKITVAADAD QASVEALGMA DEQVIKYLDG VTVRKVIYVP GKLLSIVAN
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