Gene Shewana3_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0998 
Symbol 
ID4477526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1168161 
End bp1168799 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content50% 
IMG OID639725532 
Productnicotinate-nucleotide adenylyltransferase 
Protein accessionYP_868639 
Protein GI117919447 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000080007 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.106011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG GTATTTTAGG CGGCACCTTC GACCCCATAC ATTACGGCCA TATTCGCCCC 
GCGATGGAAG TCAAAGCCAG CCTCAAGCTG GATAAAATCC TGCTGATGCC CAACCATATT
CCGCCGCATA AAAACACCAC CCACTCGAGC ACGGCGCAGC GGCTCGAAAT GGTCGCGCAG
GTATGTGAGG CATTAACCGG TTTTGAGCTT TGTGATATCG AAGCTAAACG CGACAGCCCA
TCCTATACGG TTGTCACCCT TCAGCAGTTA AGTCGGCTTT ATCCCGATGA CGAACTGTTT
TTTATTATGG GGATGGATTC GTTTATTCAC CTGCAAAGCT GGCATAAATG GCTGCAACTG
TTTGAATTAG CCAATATTGT GGTATGTCAG CGCCCGGGCT GGCATTTAGC CGAAGGGCAC
CCAATGCAGC ATGAACTCAG CGCACGTCAC GCAACGCTTG AAGCCTTAAG TCACTCAAGC
GAGCCGCAAC ATGGGCGCAT CTTTACCGTC GACATCAGCC CACAGGATAT TTCGTCCACT
CAAATTCGCT CACAGCTGGC CATGGGGGAA ATTCCACAGG ACGCCCTCCT ACCCGTCACT
CTAAATTACA TTCAAAAACA ACGGCTTTAT TTTTCTTAG
 
Protein sequence
MRIGILGGTF DPIHYGHIRP AMEVKASLKL DKILLMPNHI PPHKNTTHSS TAQRLEMVAQ 
VCEALTGFEL CDIEAKRDSP SYTVVTLQQL SRLYPDDELF FIMGMDSFIH LQSWHKWLQL
FELANIVVCQ RPGWHLAEGH PMQHELSARH ATLEALSHSS EPQHGRIFTV DISPQDISST
QIRSQLAMGE IPQDALLPVT LNYIQKQRLY FS