Gene Shewana3_0991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0991 
Symbol 
ID4477519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1160999 
End bp1162174 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content47% 
IMG OID639725525 
Productpenicillin-binding protein 6 
Protein accessionYP_868632 
Protein GI117919440 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000007627 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.347803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATT TTGTAAAAAG TCCCATTAAA ACATTGCTGC TAATTTCGAG TGTTTCTCTT 
CCTGTTTATG CTGCGCAGCC GATTGTTACC CCTGATGCAC CTACAGTTGC CGCCAAGGCT
TACGTCTTGA TGGATTATTA CTCGGGCCAA ATCATTGCCG AAGAAAATGC CTACGAAAGC
TTAAACCCAG CCAGCTTAAC GAAGATGATG ACCAGTTACG TGATTGGTCA AGAAATCAAA
GCCGGTAACG TATCCCCAGA TGATGATGTG ACCATCAGTA AAAATGCGTG GTCGAAGAAC
TTCTCTGACT CATCAAAAAT GTTCATCGAA GTGGGTAAAA CCGTTAAGGT TTCCGACTTA
AACCGCGGCA TCATCATCCA GTCGGGTAAC GATGCCTGTG TGGCCATGGC CGAACACATT
GCCGGCACCG AAGGCGCCTT CGTCGACATG ATGAACTCAT GGGCCAAGCA GCTTGGCATG
CGTGACAGCT ACTTCGAAAA CTCCCACGGT TTAGACTCAG AAAACCACAA ATCCACTGCC
TACGATATGG CGTTATTAGG TGCTGCGCTT ATCCGTGATG TGCCTGAAGA ATACCGTGTC
TACAGCGAAA AATATTATAC CTTCAACGGT ATCAAGCAAT ATAACCGCAA CGGCCTGCTG
TGGGATAACA GCATGAATGT CGACGGTATT AAAACCGGCC ACACCTCTGG CGCGGGTTAT
AACTTAGTCG CATCTGCTAC CAAAGACGGC ATGCGTTTAA TTTCAGTGGT AATGGGCACC
CAGAGTGAAG CCGCCCGTAA AGCCGAAAGT AAAAAGCTGC TTACCTATGG TTTCCGCTTC
TTCGAAACCG TAACCCCTTA CAAGGCGGGC GACAGCTTCG TGACCCAACA AATTTGGTAC
GGCGATAAGA GCACTGTCGA TTTAGGTGTT GCTACTGATA CCCCAATAAC CATCAGCCGT
GGCCGTGCGA AAGACTTAAA AGCCAACTTC GAACTGACTA AGCCACTGGA TGCACCACTG
AAAAAAGGTG AAACCGTTGG CCGCTTATAC TTCCAGTTAG ATGGCAAAGA TATTGCGCAA
TTCCCGCTGG TTACCCTGCA AGAAGTCAAT GAAGGCAGCT GGTTCAGCAA ATTAGTTGAT
TACTTTAAGC AACTGTTTTC TGGTTGGTTT AGCTAA
 
Protein sequence
MMNFVKSPIK TLLLISSVSL PVYAAQPIVT PDAPTVAAKA YVLMDYYSGQ IIAEENAYES 
LNPASLTKMM TSYVIGQEIK AGNVSPDDDV TISKNAWSKN FSDSSKMFIE VGKTVKVSDL
NRGIIIQSGN DACVAMAEHI AGTEGAFVDM MNSWAKQLGM RDSYFENSHG LDSENHKSTA
YDMALLGAAL IRDVPEEYRV YSEKYYTFNG IKQYNRNGLL WDNSMNVDGI KTGHTSGAGY
NLVASATKDG MRLISVVMGT QSEAARKAES KKLLTYGFRF FETVTPYKAG DSFVTQQIWY
GDKSTVDLGV ATDTPITISR GRAKDLKANF ELTKPLDAPL KKGETVGRLY FQLDGKDIAQ
FPLVTLQEVN EGSWFSKLVD YFKQLFSGWF S