Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0989 |
Symbol | lipB |
ID | 4477517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1159865 |
End bp | 1160518 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725523 |
Product | lipoate-protein ligase B |
Protein accession | YP_868630 |
Protein GI | 117919438 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000765019 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.947526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAAGACA CCACTTTGCA TATTCGGCAT CTGGGACAAC AGGATTACGA GTCTGTGTGG CATGCGATGC AGCATTACAC CGACACACGT AACAGCGATA GCCCAGACGA ACTGTGGATC GTTGAACATC CACCCGTATT TACCCAAGGC CAAGCAGGTA AAAGCGAACA TATTTTGAAT CCGGGTGATA TTCCCGTGAT CCAAGTGGAT CGTGGCGGCC AAGTGACTTA CCACGGGCCG GGACAATTAG TTGTCTACCC TCTCCTCGAT ATTAAACGCA GCAAGATTGG CGTCCGTCAG CTCGTGACCC ATATCGAGCA AAGCATTATC GATATGCTCG CCAAATACGA TATCAATGCC TACGCCAAGG CCGATGCGCC GGGCGTGTAT GTGGATCAGC GCAAAGTCGC CTCTTTAGGG CTTCGCATTC GTAAGGGCTG CTCCTTCCAC GGCTTAGCAC TGAATGTCGA TATGGATCTT GCGCCGTTTC GCCGCATTAA CCCTTGCGGT TATGCCGGGC TTGAAATGGT GCAATGCAAG GAACTCGGCG GCCCACAAAC CGTGATAGAA GCAGGCGACC AACTCATAAT TACCCTTAGC CAACTATTGG GCTACCAACA ACTAGTTCAT CATCAAGGAT TAGCAGCGTC ATGA
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Protein sequence | MQDTTLHIRH LGQQDYESVW HAMQHYTDTR NSDSPDELWI VEHPPVFTQG QAGKSEHILN PGDIPVIQVD RGGQVTYHGP GQLVVYPLLD IKRSKIGVRQ LVTHIEQSII DMLAKYDINA YAKADAPGVY VDQRKVASLG LRIRKGCSFH GLALNVDMDL APFRRINPCG YAGLEMVQCK ELGGPQTVIE AGDQLIITLS QLLGYQQLVH HQGLAAS
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