Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0967 |
Symbol | |
ID | 4478893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1134216 |
End bp | 1135376 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725500 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_868608 |
Protein GI | 117919416 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00370508 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGTCG CGTTGACAAA GTCTGCCTTA CTCGTACTCG AAGATGGAAC CGTATTCACT GGCACAGCAA TTGGTGCCGA TGGTCTCTCT GTTGGTGAAG TTGTTTTTAA CACTTCCATG ACAGGATACC AAGAAATTTT AACTGATCCC TCTTATTCAC GCCAAATAGT AACTTTAACC TACCCCCACA TTGGTAACAC TGGTACCAAT AATGAAGACG TCGAATCCAA TGGGGTTCAT GCTTGTGGTT TAATCATTCG CGATCTTCCA CTCGTAGCAA GTAGTTTCCG CAATCAGCAA ACCCTCAGTG ATTATCTCAA AGCGAACAAT GTTGTTGGCA TCGCAGATAT CGATACTCGT AAATTAACTC GAATCCTCCG TGAAAAAGGT GCCCAAGCGG GTTGCATCAT GGCAGGTGCT GACTTAGATG AAGCGAAAGC ACTGGCTGCG GCTAAAGCCT TCCCAGGTTT AAAGGGCATG GATTTAGCAA AAGAAGTGAC GACTGACAAA GCTTACCCAT GGCGCAAGGG TAGCTGGCGT TTAGTGGGCG GCTTGCCTGA AGATACACCT GCCGAAGCGC TGAAGTACAA AGTCGTTGCC TACGATTATG GCGTTAAGCA AAACATCCTG CGTATGTTGG TTGACCGTGG CTGTGACGTC ACCGTTGTTC CGGCAAAAAC ATCGGCTGCT GACGTGTTAG CGATGAACCC AGACGGTGTG TTCCTCTCTA ACGGTCCTGG CGACCCAGAG CCATGCGACT ACGCGATTGA AGCGATTCAA CAAATCCTGA AAACTGATAC GCCGATTTTC GGTATCTGTT TAGGCCACCA GTTACTGGCA TTGGCATCAG GCGCGAAAAC CTTAAAGATG AAGTTTGGTC ACCACGGTGC TAACCACCCA GTGAGCAATA TCGAAAAAGG TAACGTGATG ATCACCAGCC AAAACCACGG TTTTGCTGCC GATGAAGCCA CATTACCTGC CAATATCAAA GTGACCCACA AGTCACTGTT CGATGGTTCA CTGCAAGGTA TCCATCTAAC GGACAAACCT GCGTTCAGCT TCCAAGGTCA CCCTGAAGCG AGCCCAGGTC CGAACGATGC GGCCCCACTG TTCGATCACT TTATCGAGCT TATTGAACAA TACCGTCAGA ACGCTAAGTA A
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Protein sequence | MEVALTKSAL LVLEDGTVFT GTAIGADGLS VGEVVFNTSM TGYQEILTDP SYSRQIVTLT YPHIGNTGTN NEDVESNGVH ACGLIIRDLP LVASSFRNQQ TLSDYLKANN VVGIADIDTR KLTRILREKG AQAGCIMAGA DLDEAKALAA AKAFPGLKGM DLAKEVTTDK AYPWRKGSWR LVGGLPEDTP AEALKYKVVA YDYGVKQNIL RMLVDRGCDV TVVPAKTSAA DVLAMNPDGV FLSNGPGDPE PCDYAIEAIQ QILKTDTPIF GICLGHQLLA LASGAKTLKM KFGHHGANHP VSNIEKGNVM ITSQNHGFAA DEATLPANIK VTHKSLFDGS LQGIHLTDKP AFSFQGHPEA SPGPNDAAPL FDHFIELIEQ YRQNAK
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