Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0964 |
Symbol | |
ID | 4478890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1131543 |
End bp | 1132352 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639725497 |
Product | peptidase M48, Ste24p |
Protein accession | YP_868605 |
Protein GI | 117919413 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00161877 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAA CAACACTCGC CTTAGTGGCG GTTGGACTCA CGTTAGGATT ATCGGGCTGC GCGACCACTA AATCGCCCAC GGGGAGGGGT CAAACCTTGC TGTATTCGGC ATCGCAAATG CAGCAAATGG GGGATGCTTC TTTTGAAGAA ATGAAAAAGC AGCAAAAGAT CAGTAGCGAT AAAAAGCTGA CTCAGTATGT AAATTGCGTG GCGAATCGCG TCACTGCAGT GCTGCCCGAT CAAAGCCAGA AGTGGGATGT CGTCTTGTTC AACTCCGAGC AAGTTAACGC CTTTGCATTG CCTGGCGGAC ACATTGGTGT GTATACCGGC TTACTTAACG TCGCGAGTAC TCCGGACCAA CTGGCGACCG TATTAGGCCA TGAAGTGGCC CACGTATTAG CCCAACACGG TAATGAACAG GTCTCTCGGG CGCAGATGAC GGGCATGGGG ATGCAAATCG CCGATGCAGC CCTTGGCGCG AGTGGAGTCT CAAACCGTGA CTTATATATG TCTGCCTTAG GACTGGGGGC GCAGGTCGGG GTGATTTTAC CCTTTGGTCG CGCTCAGGAG AGTGAGGCAG ATGTGATGGG GCTGGAGCTG ATGGCGAGGG CGGGATTCGA CCCAGCGCAG AGCGTGGTGC TGTGGCACAA TATGTCGAAA GCGGGTGGTA GCCAAGGGCC AGAGCTGTTA TCAACGCATC CATCCAACAG CAATCGTATC GCCCAACTCG AGCAATTACA GGGGCAAATG CAGCCTTTGT ATCAGAGCGC AAAGGCAAGT GTTAAAAACC AATGCGTGTT GCCGAAATAG
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Protein sequence | MKATTLALVA VGLTLGLSGC ATTKSPTGRG QTLLYSASQM QQMGDASFEE MKKQQKISSD KKLTQYVNCV ANRVTAVLPD QSQKWDVVLF NSEQVNAFAL PGGHIGVYTG LLNVASTPDQ LATVLGHEVA HVLAQHGNEQ VSRAQMTGMG MQIADAALGA SGVSNRDLYM SALGLGAQVG VILPFGRAQE SEADVMGLEL MARAGFDPAQ SVVLWHNMSK AGGSQGPELL STHPSNSNRI AQLEQLQGQM QPLYQSAKAS VKNQCVLPK
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