Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0937 |
Symbol | |
ID | 4478863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1096680 |
End bp | 1098731 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725470 |
Product | TonB-dependent receptor |
Protein accession | YP_868578 |
Protein GI | 117919386 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000203673 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAGTC GCTACTTTGT CATGTCGCTG ACCGCGCTTG CGGTTTCCTG TGTCTACACT CATCCCCTCA AAGCAAACCC ACTCTATTCT CAAACACTCG ATCTGATTGA GCTCAATGAC CAATATCACT CCAGTGATGA TGGGATGCAG CTGAGTTACT TAAATAGCTT AACCTTATTG CGGGCCGACC ACAGTGGAAA TACCGCGAAT ATCAGTATGC GCTCCGCTAG CCAAGGTGTG GCCGTGATGC AAGATAGGGT GTATTTTTCA CCCGCGCCTT ATTCGGCGCC GCAGTTGCAG TTATTGCCTA ACCTTTTACT ACAGCAAAAT GTTACTAGCA TACCACTGGC GGATATGACG GTAGGCGGGC AGGGCGCTTT CGGTGTGGTG AATTATCAGA GCCTTGAAAT AGCTAACCGA CCTCAGTCGG GCAGCTTTCT CGTTGAAGGT TCGACAGAGT CGGATTTGAA TGCCGGCATG AGTTGGGGCG TTAAGCAAAA AGAATATGGC GCATTATTCG CAGCGAATTA CCAGAAAGAA CAAGGTGATG CGAATTTTTT CAATGGCAGC GATGCCGATA GAACCAAAAC GGATATGTTG TTCAAGGTGA ATGCGGCAAG TTTGCTTGGC GCACGCAGTC CGCAGCAGAC GGAATTTACC TACCAATTTA TCGATGATAA CAGTTATCGC TCGCAGCTTG GTGTCACCAC GGCGGACTGG CAGCAGGATC CCTTACTCTT GTACTCGGCA ACGGCGCAGG ATAAGCATAA AGGGCGGCAG CACAAGTATC AGCTTTCACA CCAAGTGGAT TTAGGCGGCA GTAAAGTGAT CAGTGACTTT TACTATCAGT CCTATTCACA ACAGCTGGCA CAACTTGGGT TGTTTAATGG GCAAGAGATT GACACAGCAA CGCTTGCCGA TATCGCCGCC TTTGATCGAG CTCCAAGTGC AAATGGCGCC GATTTAAATC TGCTCGTCCA AGATAACGAT TACAGTGCCT TTGGCGCCCA GACCCAAGCC ATAAACCAGT ACGGCGAACA TCAGATCATT TACAGCGCTC GTTATCATAC GGATAAGGCG GAAATGCGCT TTGGCGAGCA AACGGCGTTA TGGCAAGCGG ATAGAAGCCT TGCGGTTGAT GAGTCAAACG CGTTGTTCGC TTATACCGAT GATGCCACTG CGCTAACGTC GGCCATTGAT TCGCTATTTC GCTGGCAAGG CATGCAAATC AAGTTAGGCC TGACTTACGA GCATGTGAGT GTTAATCGTG AAGTGAATCA GCCTGTTGCG AGACTCGATG AAGCGGATTT CTCCGACAGT GATTGGATGC CGCAATTAGG TGTGCTTTAT GATGCGGGCG ATTGGCGTTT TAGTACCGAT ATCCGTAGGG CATGGACTGC GGCGAGTGCG GGAAATACTA CACAAGAGGC TCAGGTGTCG CTGCACTATC AAGTGAGCGC CCAATATGCG CGTGAAGGGA TAAAAGCCGA TTTACGGGCC TATGTGCAAG AGTTCGACAA TTTGCATGTG GACTGCGATA GCTATTCGAT GTGCGCCGAT GCACGCTTGT TAACCCAAGA GAATATTCCC GATGTACTCA CCTATGGTGT AGAACTTGGC CTTGGCTATC GCTGGGACTT GGGTGGGGTA GAGCTACCCT TAGGGCTAAA TTATCAATAT CTTAGCGCTG AGTATCAAAC CAGTACTTGT ACCGATGTTC AAGGCTGTGT TCTAGAGGGC GATAGATTAG CTTGGTTACC CGAACATCAA TTGCAGTTGA GTGCAGGGGT TAACTATGGC GAATATCAAT TAAATCTTGA GGCGGCCTAT CAATCTGAGC GCGATTTCAG CCAATTTGGC AGTGAGTTGC AACGGGTATC AGGCCAATGG CGGGTCGATT TAGCGGCAAA CTATGATTTT GATAAACACC ATAGGTTGTA TTTTAGGGTA GAAAACCTCC TCGATGAGTC CTTAGTGACC GCAGCATCAA ATAGCGGAAT TCGGACTGAA AATGGACGGA TCAGCTATTT GGGTTATCAG TGGCGTTTCT AA
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Protein sequence | MSSRYFVMSL TALAVSCVYT HPLKANPLYS QTLDLIELND QYHSSDDGMQ LSYLNSLTLL RADHSGNTAN ISMRSASQGV AVMQDRVYFS PAPYSAPQLQ LLPNLLLQQN VTSIPLADMT VGGQGAFGVV NYQSLEIANR PQSGSFLVEG STESDLNAGM SWGVKQKEYG ALFAANYQKE QGDANFFNGS DADRTKTDML FKVNAASLLG ARSPQQTEFT YQFIDDNSYR SQLGVTTADW QQDPLLLYSA TAQDKHKGRQ HKYQLSHQVD LGGSKVISDF YYQSYSQQLA QLGLFNGQEI DTATLADIAA FDRAPSANGA DLNLLVQDND YSAFGAQTQA INQYGEHQII YSARYHTDKA EMRFGEQTAL WQADRSLAVD ESNALFAYTD DATALTSAID SLFRWQGMQI KLGLTYEHVS VNREVNQPVA RLDEADFSDS DWMPQLGVLY DAGDWRFSTD IRRAWTAASA GNTTQEAQVS LHYQVSAQYA REGIKADLRA YVQEFDNLHV DCDSYSMCAD ARLLTQENIP DVLTYGVELG LGYRWDLGGV ELPLGLNYQY LSAEYQTSTC TDVQGCVLEG DRLAWLPEHQ LQLSAGVNYG EYQLNLEAAY QSERDFSQFG SELQRVSGQW RVDLAANYDF DKHHRLYFRV ENLLDESLVT AASNSGIRTE NGRISYLGYQ WRF
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