| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0904 |
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| Symbol | |
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| ID | 4477115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1054793 |
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| End bp | 1057405 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725439 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_868547 |
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| Protein GI | 117919355 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00895191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATG TTAATAAGTT AACGGCTATT TCTTTAGCTG TGGCCGCAGC TTTGCCAATG
ATGGCAAGCG CTGATGTGAT GATCACTGAA TATGTTGAAG GTAGCTCGAA CAACAAAGCT
ATCGAATTGT ATAACAGCGG TGATACGGCA ATTGATCTGG CGGGTTATAA ACTCGTTCGT
TATAAAGATG GCGCCACTGA TGCTTTAGAT ATGCAAGCAT TAGATGGACA AAGTATTGCG
CCAAAATCCA CAAAAGTGAT TTTAAACTCA AGCGCAGTCA TTACTCTTCC TCAAGGTGTC
GATAGTTTTT CGGGTTCTTT AAGTTTTAAC GGTGGTGATG CGGTTGCCTT AGTCAAAGAT
GGTGCCGTAG TCGATATTAT CGGTGATGTG CCTACGCCGA CAGGATGGGG CCTCGATGTC
ACCCTGCAGC GTAAACTCGA TTCATTAGTC GCCAACACTG TTTTTAATCC TGCCCAGTGG
GAACAATTAC CTAAGGACAC TTTCACCGGT TTAGGTTCGC TAGAAGCGGC GACTGAGCCT
GAAACGCCCG TCTTTAGCTG CAGCGGTGCG AAAATCGTCC CTATTTATCA AGTCCAAGGT
GCGGGTGAAT CCAGCCCTTA TGTACCTGAA GGCGCATTCG AGTCTGAAAC CGAAGTGACG
GTTCGCGGCG TAGTGACTGC CCGTGGCGAG AGCTTATTTA AAGGCTTCTA CCTCCAAGAA
GTGAAAGGCG ATAACTCGCC ATACACCTCC GACGGTGTGT TCGTGTTTTT AGGTGAGAAT
CCACCAGAAG CGATTCAACC AGGCGTTGAA GTCTGTGTTC AGGGTAAGGT GAAGGAATAC
TTCGGCCTAA CCCAAATCGA TATTAAAGCC GATAAGAAAT TTGAAGTGGG TGCTAAGGGC
GAAGTCCCAG CTGCAACACC ATTCTACGTA GCCGATGGCG AAACCTTAGC GCAGGCATTA
GAGCGCTACG AAGGCATGAA CGTGAAACTG GATGCGGGTA GCGATCTGAA GATCAGCCGT
ACCTTCAGTT ACGATTATGC GGGCCGTCGT AATAACATGT TGGTGTCTTA CAAGGCGCCG
TTGATGAAGC CGACTCAGCT CTATCCAGCA TTGTCACCAG AAGCGACGGC GTTAGTTAAA
TCTAACCTTG AAAATCAGCT GTTTATCGAA TCTGACTACA AGCCAGCCGA CGGTGTTATC
CCTTACTTCC CTGACTTTAA CGTCGAAACT GGTTATATCC GTGTGGGTGA CCAACTGACT
AACCTCGAAG GGGTGATTGG TTATAGCTAC GGTGCTTACC GTTTGGTGGC AACTAACACC
ATTACCGCTG GTGACTTTAT CCGCGGTGAC GATAGAACCG ACGCGCCAAG TGTGGCAACT
AAGGGCGATA TCCGTGTTGC TAGCTTTAAC GTACTGAACT TCTTTAACGA TGTTGTTGGC
GGAGATACTA ACCCATCGGG CAGTAACCGC GGCGCCTTGA CTGAAGAAGA AATGCTGCTG
CAACGCGCGA AAATCGTCAG CGCGATTACC GCCATGAACG CCGATATCGT CGGTTTAATG
GAAATCGCTA ACAACGGCTT TGGTGAAAAG AGCGCGATTA AGAACTTAGT CGATGCCTTA
AACGAGAAGC AAACCGCTGA CAATGCTTAC AGCTTCGTTG AAATCACCGA TGAAGATAAA
TACGACGGTA AGTACTTCGG TAGCGATGCC ATTACTGTGG GTATGCTTTA CCGCGCGGGT
AAAGTGAGCC TAGCGGGTGC GGCTCGTGCG ATTGATACCC CTGAGCAACA CGCGACAGCT
GGCAGTGTGA CTCGCACTAA AGACGGCAAG ACTGAGACTA ATCCAGGTAA CGATGCTTAC
CAACGTCACA GCTTAGCGCA AACCTTTAAG ATCCATGATG AAAACTTAAC AGTTGTTGTT
AACCATCTGA AATCAAAAGG TTCAGGCTGT TTAGAAGATT GGGTCAACTT CGAAGAGTCA
GTCGATCCTG CCGATCAACA AGGCAAGTGT AACGCCTTCC GTGTATCGGC GGCTAAAGTG
CTCGGCGAAG CCTTAAAAGA CGTTAAAGGC GATCTGCTGG TGATTGGTGA TATGAATGCC
TACGGCATGG AAGATCCTAT CCGCGTATTG ACCGATTACG ATGCGAGCAA GTCTGAGCGC
GATATCATGA CGGCCTCATG GACTACTCTT GATGGCAAAG TGTTTGAGCG CCAAGGTAGC
AAGATTGAGA AGGGCTATGG CCTAATCAAC CTCAATACCA AGGCCCATGG CGCAGGTACT
TACTCATACA GCTACAACGG TGAGTTAGGT AACCTAGACC ATGCCTTAGC AAACACCAGT
CTTGCCAAGC GTTTAGTGGA TATCGAAGAT TGGCATATCA ACTCGGTTGA ATCTAACCTG
TTCGAATATG GCAAAAAATT CTCTGGCGAA CTGGCCAAAT CTGAGAATGC TTTCTCAGCC
TCTGACCATG ACCCTGTGAT TGTGGCATTG AGCTACCCAG CGCCAGTTGA GCCACCAAAA
CCTGAGCCAA AGCCAAAGGA TGATGGTGGT GCATTAGGAT ACTTAGGTTT AGCCTTACTA
TCCCTATTCG GTCTGCAACG CCGTCGCCGT TAA
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| Protein sequence | MDNVNKLTAI SLAVAAALPM MASADVMITE YVEGSSNNKA IELYNSGDTA IDLAGYKLVR
YKDGATDALD MQALDGQSIA PKSTKVILNS SAVITLPQGV DSFSGSLSFN GGDAVALVKD
GAVVDIIGDV PTPTGWGLDV TLQRKLDSLV ANTVFNPAQW EQLPKDTFTG LGSLEAATEP
ETPVFSCSGA KIVPIYQVQG AGESSPYVPE GAFESETEVT VRGVVTARGE SLFKGFYLQE
VKGDNSPYTS DGVFVFLGEN PPEAIQPGVE VCVQGKVKEY FGLTQIDIKA DKKFEVGAKG
EVPAATPFYV ADGETLAQAL ERYEGMNVKL DAGSDLKISR TFSYDYAGRR NNMLVSYKAP
LMKPTQLYPA LSPEATALVK SNLENQLFIE SDYKPADGVI PYFPDFNVET GYIRVGDQLT
NLEGVIGYSY GAYRLVATNT ITAGDFIRGD DRTDAPSVAT KGDIRVASFN VLNFFNDVVG
GDTNPSGSNR GALTEEEMLL QRAKIVSAIT AMNADIVGLM EIANNGFGEK SAIKNLVDAL
NEKQTADNAY SFVEITDEDK YDGKYFGSDA ITVGMLYRAG KVSLAGAARA IDTPEQHATA
GSVTRTKDGK TETNPGNDAY QRHSLAQTFK IHDENLTVVV NHLKSKGSGC LEDWVNFEES
VDPADQQGKC NAFRVSAAKV LGEALKDVKG DLLVIGDMNA YGMEDPIRVL TDYDASKSER
DIMTASWTTL DGKVFERQGS KIEKGYGLIN LNTKAHGAGT YSYSYNGELG NLDHALANTS
LAKRLVDIED WHINSVESNL FEYGKKFSGE LAKSENAFSA SDHDPVIVAL SYPAPVEPPK
PEPKPKDDGG ALGYLGLALL SLFGLQRRRR
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