Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0899 |
Symbol | |
ID | 4477110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1050067 |
End bp | 1051467 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639725434 |
Product | TPR repeat-containing protein |
Protein accession | YP_868542 |
Protein GI | 117919350 |
COG category | [S] Function unknown |
COG ID | [COG3014] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000307995 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA CCTTCATATA CTCTTTTATT AAACCCACAC TTAGCACGCT AATGCTCGCC GCCATCTTAG GCTCGAGCGG CTGTGCCTAT AACAGTATTT TTATTAATTA TCCGGCACAA ATTGCACCGA TAAAACAACA GCTCAATACC GCAACGCCCA TGGCGGATAT CGACAAACTA GCCAGCAATA TCCAAGGTAA TGATGGCCTG CTCTACGCCC AAGAAGCAGG ACGTGTAGCG CAGGTGGCCG GCGATTTTGC CAGCAGCCGT AAGTACTATC AGCAAGCGGT TGAGGCCTAT ACTGCCTTCG ATGATAAAGC CAAGATTAGC GCCAGCGATA TAGGTGCAAC GGCCACCAGT TTAGTATTAA ACGATAATGC CATTCCCTAT CGTGGCCCAG GCTACGAGCG CATTATGCTG CACCAATATC AAGCCTTGAA TTACCTGTTC AGCGGTGACT ATCAAGGCGC ATTAGTGGAG GTTCGCCGCA GTAACGAGCT GCAAGGCTCT GAGCAGGAGC GTTATCAAAA GTCACAAAAA TCCGTACAGG CCATGGCCAA TGGCACCATA GATGCCGAAG TGAATAAGCT AGGCCAAGCC GCTGGCACAG TGACCAGCTC CTTCCTCAAT GCCTACAGCT ACTACACTAC GGGTCTGTTG CATGAAGTAT TAGGTGAGCC AAACGATGCC TTTATCGACT ACCGTAAAGC GGCGCAAATC ACTCCAGATA ACACTTATCT GCAACAGGAT TTAGTTCGTC TTGCCAAGCA ACTCGGCATG CCGCAATACG ATGAGTTTAA AAGGCGCTGG GGCGATGCCA AGCTTCCCAA GGCGGGTGAA GGCCAAGTGA TTCTCATGGT CGAAAAGGGC TTTGTACCTG AAAAACAAGC GCTCACAGTG CCCTTCACTA TCCATGGCAA TTGGCAAACC GTCTCTTTGG CAACCTATGG ACCGAACAAT AGTTTTGTTG CCGAGGCTCA AGTGCAAGGC TTAGGCTCAG TGCTGAAAAC CGAGCCTATC GCCAATATCG ATGCCCTAGC GATTAACGCG CTCAAGGAAG ATTTGCCCGG TACTTTGGTT CGCCAAGTCG CGCGGGTGTA TGCCAAATCG GAAATGGCCT ATCAGGTCGA AAAAAGCGGT AAGCCTGGCA ATAATGCTGC CGATATTGGC AGTATCGCGA TGCAGATTTT TAACGTGGTC ACCGAGCAGG CGGATCGCCG CAGTTGGTTG ACCCTGCCGA AACAGGCGCA AATTGGCAGA CGTTACCTCA ATCCGGGGCA ATACACGCTA CAGTTGGACA AGGCACCACC GGCCAAAATT GACGTTGCCG CAGGCAAGAC CACCTTGGTC TGGGCAATTG ATACTGGTAA TTACACCCGA ATTTATTCAA TAATCATTTA A
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Protein sequence | MKTTFIYSFI KPTLSTLMLA AILGSSGCAY NSIFINYPAQ IAPIKQQLNT ATPMADIDKL ASNIQGNDGL LYAQEAGRVA QVAGDFASSR KYYQQAVEAY TAFDDKAKIS ASDIGATATS LVLNDNAIPY RGPGYERIML HQYQALNYLF SGDYQGALVE VRRSNELQGS EQERYQKSQK SVQAMANGTI DAEVNKLGQA AGTVTSSFLN AYSYYTTGLL HEVLGEPNDA FIDYRKAAQI TPDNTYLQQD LVRLAKQLGM PQYDEFKRRW GDAKLPKAGE GQVILMVEKG FVPEKQALTV PFTIHGNWQT VSLATYGPNN SFVAEAQVQG LGSVLKTEPI ANIDALAINA LKEDLPGTLV RQVARVYAKS EMAYQVEKSG KPGNNAADIG SIAMQIFNVV TEQADRRSWL TLPKQAQIGR RYLNPGQYTL QLDKAPPAKI DVAAGKTTLV WAIDTGNYTR IYSIII
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