Gene Shewana3_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0861 
Symbol 
ID4477072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1003095 
End bp1003979 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content45% 
IMG OID639725397 
Productphospholipase A1 
Protein accessionYP_868505 
Protein GI117919313 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2829] Outer membrane phospholipase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000319394 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTAT TTTATAAAGG TATCGCATTA ATTGGACTGT TAACTTGTAC AGGACTTCAA 
GCGGAAGAAT CCCTCGTTAA AGGACGGGTA CAGGACGAGC TAGCCACCTC AGAACGTCCA
TTCGTGATCA CGCCGCATAA AGTGAATTAC ATTTTACCCG CCACTTACAA CCCCGATCCC
AATATGGCGC CCTTCGCCCA AGATGCGGCC GAAAACGACT ATACCCTGGA TGAAATGGAA
GCTAAGTTCC AGATAAGTTT TAAATTTCCT CTTTGGTATA ATGTCTTTGG CGATAATGGC
CACCTGTTTT TTGCCTACAC CAACCAGTCC TATTGGCAGC TTTACAACAA GGATATTTCT
TCCCCCTTCC GTGAGACTAA CCACGAACCC GAAATCTTTA TGCTGTTCAA CAACGATTGG
AAAATCGGCA GCGTGACTAA CTCCTTCTGG GGCTTTGGCG CCGTGCATCA ATCTAATGGT
AAGTCAGGGT TATTATCCCG TAGCTGGAAC CGTATCTATG GCACCATGAT CTTCGATGCC
GGCCCGCTGG CCTTTGCCAC TAAGGTGTGG TGGCGTATTC CAGAGGACGA AAAAACCGAT
ATCCATCAAC CCCGCGGTGA CGATAACCCC GATATTGATG AATACATAGG TAAAGCCGAG
TTTGTAGGGG TTTATGGCAT TGATGACCAT AGATTCACCC TCACCCTAAA AACTAACTTT
AAAGATATTG ATCGAGGATC GGCAGAATTT ACATGGAGCT ATCCGATAAT CGGTAATTTA
CGCCTTTATA CTCAATACTT TAACGGCTAT GGCGAGAGTC TTATCGACTA CAACTACCAT
AACCAACGCA TAGGTATCGG CCTATCACTC AACGATATTC TCTAA
 
Protein sequence
MSLFYKGIAL IGLLTCTGLQ AEESLVKGRV QDELATSERP FVITPHKVNY ILPATYNPDP 
NMAPFAQDAA ENDYTLDEME AKFQISFKFP LWYNVFGDNG HLFFAYTNQS YWQLYNKDIS
SPFRETNHEP EIFMLFNNDW KIGSVTNSFW GFGAVHQSNG KSGLLSRSWN RIYGTMIFDA
GPLAFATKVW WRIPEDEKTD IHQPRGDDNP DIDEYIGKAE FVGVYGIDDH RFTLTLKTNF
KDIDRGSAEF TWSYPIIGNL RLYTQYFNGY GESLIDYNYH NQRIGIGLSL NDIL