Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0861 |
Symbol | |
ID | 4477072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1003095 |
End bp | 1003979 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639725397 |
Product | phospholipase A1 |
Protein accession | YP_868505 |
Protein GI | 117919313 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2829] Outer membrane phospholipase A |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000319394 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCTAT TTTATAAAGG TATCGCATTA ATTGGACTGT TAACTTGTAC AGGACTTCAA GCGGAAGAAT CCCTCGTTAA AGGACGGGTA CAGGACGAGC TAGCCACCTC AGAACGTCCA TTCGTGATCA CGCCGCATAA AGTGAATTAC ATTTTACCCG CCACTTACAA CCCCGATCCC AATATGGCGC CCTTCGCCCA AGATGCGGCC GAAAACGACT ATACCCTGGA TGAAATGGAA GCTAAGTTCC AGATAAGTTT TAAATTTCCT CTTTGGTATA ATGTCTTTGG CGATAATGGC CACCTGTTTT TTGCCTACAC CAACCAGTCC TATTGGCAGC TTTACAACAA GGATATTTCT TCCCCCTTCC GTGAGACTAA CCACGAACCC GAAATCTTTA TGCTGTTCAA CAACGATTGG AAAATCGGCA GCGTGACTAA CTCCTTCTGG GGCTTTGGCG CCGTGCATCA ATCTAATGGT AAGTCAGGGT TATTATCCCG TAGCTGGAAC CGTATCTATG GCACCATGAT CTTCGATGCC GGCCCGCTGG CCTTTGCCAC TAAGGTGTGG TGGCGTATTC CAGAGGACGA AAAAACCGAT ATCCATCAAC CCCGCGGTGA CGATAACCCC GATATTGATG AATACATAGG TAAAGCCGAG TTTGTAGGGG TTTATGGCAT TGATGACCAT AGATTCACCC TCACCCTAAA AACTAACTTT AAAGATATTG ATCGAGGATC GGCAGAATTT ACATGGAGCT ATCCGATAAT CGGTAATTTA CGCCTTTATA CTCAATACTT TAACGGCTAT GGCGAGAGTC TTATCGACTA CAACTACCAT AACCAACGCA TAGGTATCGG CCTATCACTC AACGATATTC TCTAA
|
Protein sequence | MSLFYKGIAL IGLLTCTGLQ AEESLVKGRV QDELATSERP FVITPHKVNY ILPATYNPDP NMAPFAQDAA ENDYTLDEME AKFQISFKFP LWYNVFGDNG HLFFAYTNQS YWQLYNKDIS SPFRETNHEP EIFMLFNNDW KIGSVTNSFW GFGAVHQSNG KSGLLSRSWN RIYGTMIFDA GPLAFATKVW WRIPEDEKTD IHQPRGDDNP DIDEYIGKAE FVGVYGIDDH RFTLTLKTNF KDIDRGSAEF TWSYPIIGNL RLYTQYFNGY GESLIDYNYH NQRIGIGLSL NDIL
|
| |