| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0854 |
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| Symbol | pntA |
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| ID | 4477065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 991421 |
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| End bp | 992947 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639725390 |
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| Product | NAD(P) transhydrogenase subunit alpha |
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| Protein accession | YP_868498 |
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| Protein GI | 117919306 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
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| TIGRFAM ID | [TIGR00518] alanine dehydrogenase
[TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00327911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATTG GAATACCGAG AGAGAGTCTC GCCGGTGAGA CTCGGGTCGC CGCGACCCCT
GCCACCGTCG AACAACTTAA AAAGCTCGGC TTTGAAGTTG TTGTTGAGGC CAATGCTGGC
TTACTGTCTA GCTTTGACGA TGCCGCTTTT GAAGCCGCTG GGGCGAAGAT CACGGCAGAG
GTTTGGCAAG CGGATCTGAT TTTTAAGGTC AATGCACCGA CCGATGCTGA AATTGCGCAA
ATTAAAGAAG GCGCGACCTT AATCAGCTTT ATCTGGCCGG CTCAAAATGC TGAGTTGGTC
GAGAAACTGT CTAAACGCAA CATCAATGTG ATGGCGATGG ACATGGTGCC ACGTATTTCC
CGCGCCCAAT CCCTCGATGC TCTCTCTTCT ATGGCCAATA TCGGCGGTTA TCGCGCCGTT
GTTGAAGCCG CGCACCACTT TGGCCGTTTC TTTACCGGAC AAATTACTGC CGCGGGTAAG
GTTCCGCCAG CCAAAGTGCT GGTGATTGGT GCCGGTGTAG CGGGTCTTGC CGCCATTGGT
ACCGCAGGTT CGCTAGGGGC TATCGTTCGT GCCTTCGACA CACGCTTAGA AGTGGCCGAA
CAAATCGAAT CTATGGGTGG CCAGTTCCTC AAACTGGACT TTACCAATGA AGATGGCAGC
TCATCGGACG GTTACGCTAA AACCATGTCG GACGAGTTTA TCGCCGCCGA AATGGCACTG
TTTGCCGAGC AAGCCAAAGA AGTCGATATC ATCATTACCA CAGCGCTGAT CCCTGGCCGC
CCTGCACCTA AGCTCATTAC TAAGGCGATG GTCGACAGCA TGAAACCCGG CTCTGTGATT
GTCGATATGG CCGCGCAAGC GGGCGGTAAC TGTGAATACA CTCAGCCTAG CGAGCTATTC
GTGACCGAGA ATGGCGTTAA AGTCATCGGC TTTACCGATC TTCCCGGCCG CCTGCCCGCG
CAGTCTTCAC AGCTTTACGG CACTAACTTA GTCAACCTGA TGAAGTTAAT GTGTAAAGAG
AAAAACGGCG TCGCCAGCAT CAACTTCGAT GATGTGGTGA TGCGCAATAT GACAGTGGTC
AAAGCAGGCG AAGTGACCTT CCCGCCACCG GCGATTTCGG TGTCGGCAGC GCCCGCCAAA
CCTGCGGCTA AGGTTGAAGC CAAAGCGGCT GAAGCCAAAA AGCCATCCAA ACTTAAGTAT
ATTCTCGCTG CCCTTGGTGC TGCGGGTTTT GCCGCGGTTG CCTCAGTTGC GCCAGCCGAG
TTCTTATCCC ACTTTACGGT TTTTGTCCTG TCCTGCGTGG TGGGCTATTA CGTGGTGTGG
AACGTATCCC ACTCACTACA TACGCCTTTA ATGTCAGTGA CTAACGCGAT TTCGGGCATT
ATCGTGGTCG GCGCCTTGCT GCAAATTGGT CAAGGTTCAA CCTTGGTCAC TGTGCTGGCG
TTTATTGCCG TGCTGATCGC CAGTATTAAC ATCTTCGGCG GTTTCACCGT CACTCAGCGC
ATGCTGAAGA TGTTCCGTAA AGATTAA
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| Protein sequence | MQIGIPRESL AGETRVAATP ATVEQLKKLG FEVVVEANAG LLSSFDDAAF EAAGAKITAE
VWQADLIFKV NAPTDAEIAQ IKEGATLISF IWPAQNAELV EKLSKRNINV MAMDMVPRIS
RAQSLDALSS MANIGGYRAV VEAAHHFGRF FTGQITAAGK VPPAKVLVIG AGVAGLAAIG
TAGSLGAIVR AFDTRLEVAE QIESMGGQFL KLDFTNEDGS SSDGYAKTMS DEFIAAEMAL
FAEQAKEVDI IITTALIPGR PAPKLITKAM VDSMKPGSVI VDMAAQAGGN CEYTQPSELF
VTENGVKVIG FTDLPGRLPA QSSQLYGTNL VNLMKLMCKE KNGVASINFD DVVMRNMTVV
KAGEVTFPPP AISVSAAPAK PAAKVEAKAA EAKKPSKLKY ILAALGAAGF AAVASVAPAE
FLSHFTVFVL SCVVGYYVVW NVSHSLHTPL MSVTNAISGI IVVGALLQIG QGSTLVTVLA
FIAVLIASIN IFGGFTVTQR MLKMFRKD
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