Gene Shewana3_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0847 
Symbol 
ID4477058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp983483 
End bp985207 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content52% 
IMG OID639725383 
Productpotassium/proton antiporter 
Protein accessionYP_868491 
Protein GI117919299 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000112338 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGCAG ATTCCATCAA TAGTTTTTTT CTGATCGGTG CCTTGCTTGC CGCTGTGAGT 
GTTTTGTTAA GTCCCGTGTC TTCGCGCTTG GGTATCCCTA TCTTATTAAT TTTCCTCGCT
GTAGGGATTT TAGCTGGGGA GGATGGTCCC GGCGGTATTC TGTTTGACGA CTACTCAACC
GCTTATCTTG TCAGTAACTT AGCCTTAGCC ATTATCTTGC TCGATGGCGG TATGCGCACG
CGTGTCGCAA GCTTTAGGGT GGCACTGTGG CCAGCATTGT CGCTGGCGAC CTTTGGGGTC
GCTATCACCA CCAGTATCAC GGGCGTAATG GCCGCATGGT TATTTGACTT ACACTGGTTG
CAAGGCTTGC TGGTGGGGGC AATTGTCGGC TCCACCGATG CGGCGGCGGT ATTCTCGCTA
TTAAAGGGAC GTAGTCTTAA CGAGCGTGTT GGCGCGACGC TGGAAATCGA ATCGGGCAGT
AACGACCCAA TGGCGGTGTT TTTAACCGTA ACCCTGATTG CCATCCTCGC TAATGTGGAC
GCCGAGTTAT CCGTAAGCTT TATGCTGATA AGCTTTATCA AGCAGTTTGG TTTGGGGATT
TTCCTTGGTC TTGGCGGCGG TTGGCTGCTG TGGAAGTTGG TGAATTTAAG CAAGCTTGCC
GAAGGCTTGT ATTCGATTTT AGTGCTCAGT GGCGGTCTGA TGATTTATGC CGCCTCGAAC
AAACTCGGCG GTAGCGGCAT CCTGTCGATT TATCTCGTCG GTCTCTTCCT CGGCAACAAG
CCTACCCGCG GTCGCCATTC CATCCTAAAC GTATTGGATG GCATGACTTG GGTCAGCCAA
ATCGGTATGT TCCTCGTATT AGGGCTGCTG CTCACACCAT CTGATTTGTT GGATATTTGG
CTACCGGGCT TAGCGTTAGC CTTTGGGATG ATCCTGTTTG CCAGACCGTT AGCTGTATGG
CTCAGCTTGC TGCCCTTTAA GAGCTTTAGC AGTCGTGACC GCTGGTTTAT CTCTTGGGTC
GGGCTTCGTG GCGCCGTGCC GATTATTTTA GCGGTATTCC CTATGATGGC GGGATTACCA
GGCGCTCAGT TGTACTTTAA CTTGGCATTC TTCGTGGTGT TAGTGTCACT GCTTGTGCAG
GGGGCGTCAC TCACCACGGC GGCGCGTTTA GCTAAGGTGG AGTTACCGCC TAAGCCGTTG
CCGATTTCAC GTTCTGGGGT TGAAATATAC CCGAGCAGTG AATGGGAAGT GTTTGTGTAC
CATCTGAGTG AAAACAAATG GTGCATCGGC GAACCGCTTA AACGCCTCTC AATGCCAGAT
GGAACAAGGA TTGCGGCGGT ATTTCGCCAT AATACGCTGT TGCACCCATC GGGCAGTACC
TGCCTCGAAG CGGGGGATAT TTTGTGTGTG CTTGGGCAAG AGAAGAGCCT AGAAGCCTTA
AGTAACCTGT TTAGTCAGGC GCCCGAAACC AAGGAAGTGC CACGTTTCTT CGGTGACTTC
TTTATCGATA CCGAGGTTAA GCTGCTGGAT CTGGCGCCGA TTTATGGGCT GGAGTTAGAC
GAAGCAACCG GCGACATGAC GGTCGCAGAT TTAGTAGCGG CTGAATTAGG CTCGCATCCG
GTACTTGGGG ATCAGTTCCT ATGGCAGTCG CTGCATTGGG TGGTTGCAGG GCTCAATGAA
GGCAAAGTCA CCAATGTGGG TATTCGCTTA CCGGCGGAGG CTTAA
 
Protein sequence
MDADSINSFF LIGALLAAVS VLLSPVSSRL GIPILLIFLA VGILAGEDGP GGILFDDYST 
AYLVSNLALA IILLDGGMRT RVASFRVALW PALSLATFGV AITTSITGVM AAWLFDLHWL
QGLLVGAIVG STDAAAVFSL LKGRSLNERV GATLEIESGS NDPMAVFLTV TLIAILANVD
AELSVSFMLI SFIKQFGLGI FLGLGGGWLL WKLVNLSKLA EGLYSILVLS GGLMIYAASN
KLGGSGILSI YLVGLFLGNK PTRGRHSILN VLDGMTWVSQ IGMFLVLGLL LTPSDLLDIW
LPGLALAFGM ILFARPLAVW LSLLPFKSFS SRDRWFISWV GLRGAVPIIL AVFPMMAGLP
GAQLYFNLAF FVVLVSLLVQ GASLTTAARL AKVELPPKPL PISRSGVEIY PSSEWEVFVY
HLSENKWCIG EPLKRLSMPD GTRIAAVFRH NTLLHPSGST CLEAGDILCV LGQEKSLEAL
SNLFSQAPET KEVPRFFGDF FIDTEVKLLD LAPIYGLELD EATGDMTVAD LVAAELGSHP
VLGDQFLWQS LHWVVAGLNE GKVTNVGIRL PAEA