| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0799 |
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| Symbol | |
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| ID | 4477010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 921925 |
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| End bp | 922602 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725335 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_868443 |
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| Protein GI | 117919251 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.603428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT TTATTTACCA ACCACCAACA ACTCCCTGGC TCGATGTGCT TTACCAAGAT
AAAGACATTA TCGTCGTCAA CAAGCCTTCG GGGTTGTTAT CAGTGCCTGG TCGCGATCCC
GCCCATTACG ACAGTGTGTA CGCCCGAGTA AAAGCTGAGC ATCCGCATTG CCAAATCGTC
CATCGCCTTG ATATGGCGAC CTCAGGTGTA ATAGTGGTTG CGCTCATTCG TAGCGCCGAA
CGCGAATTAA AACGCCAGTT TCATGATAGA GAAACCAGCA AAACCTATCT CGCCAGAGTT
GCTGGACACG TTAAAAATAC AACGGGTAGC GTGGATTATC CGCTGATCTG CGACTGGCCC
AATCGCCCAA AACAGAAGGT TGACCACGAA ATAGGTAAAC CCTCATTAAC CCACTTTGAA
GTGCTAAGCC GTGCCAAACG CTCGACGCTG GTAAAGCTTA AGCCTATTAC AGGGCGCTCA
CACCAACTCA GGGTACATAT GATGGCGCTG GGGCATCCGA TCCTCGGCGA CGGCTTTTAT
GCCGATCCTT TAGCAAAATC CTTAGCACCG CGATTATTAC TCCACGCCGC AGAGCTCACC
ATCAAACACC CGTACACGGG TGAGAGCATG ACGTTCAGTG CCAATGCTTC CTTTTGTGAG
CCAGAAGGTG AGCAATGA
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| Protein sequence | MTDFIYQPPT TPWLDVLYQD KDIIVVNKPS GLLSVPGRDP AHYDSVYARV KAEHPHCQIV
HRLDMATSGV IVVALIRSAE RELKRQFHDR ETSKTYLARV AGHVKNTTGS VDYPLICDWP
NRPKQKVDHE IGKPSLTHFE VLSRAKRSTL VKLKPITGRS HQLRVHMMAL GHPILGDGFY
ADPLAKSLAP RLLLHAAELT IKHPYTGESM TFSANASFCE PEGEQ
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