| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0769 |
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| Symbol | prfA |
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| ID | 4476980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 891616 |
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| End bp | 892707 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639725305 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_868413 |
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| Protein GI | 117919221 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.081149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAT CCGTTATCCG CAAGCTGGAA GGCTTGCTCG AGCGCAATGA AGAAGTCTTA
GCCTTGCTTG GTGATGCGTC CGTTATCGCC GATCAGGAGC GTTTTCGCGC GTTATCCAAA
GAATATTCTC AGTTAGAAGA AGTGGTTGCA GGCTTTAAAG CCTACCAGCA AGCACAGGCG
GATCTTGAGT CTGCAAAGGA AATGCTGGAA GAAGATGACG CTGAAATGCG CGAAATGGCG
CAGGAAGAAA TCAAGGCAGC TAAAGCTGAA CTTGAACGTC TCGAAGCCGA GCTGCAAATT
CTGTTATTAC CAAAAGATCC TAACGACGAC ACCAACGCCT TTATCGAAAT TCGTGCCGGT
GCGGGTGGCG ACGAAGCCGC AATCTTCGCG GGTGATCTGT TCCGTATGTA TAGCCGTTAT
GCCGAAGCCA ACCGTTGGCA GCTCGAAATC ATGAGCTCGA ACGAAGGCGA ACACGGTGGC
TTTAAAGAAA TCATCGTTAA AGTCAGTGGT GAAGGTGCCT ACGGTAAACT CAAGTTTGAA
TCCGGCGGTC ACCGTGTTCA ACGTGTGCCT GAAACTGAAT CTCAAGGCCG TGTACACACC
TCTGCCGTGA CTGTGGTAGT CATGCACGAA GTGCCTGAGG CGGAAGCGAT TTCAATCAAC
CCAGCCGATC TGAAGGTCGA TACCTTCCGT TCATCGGGCG CGGGTGGTCA GCACGTTAAC
AAAACCGATT CTGCCATTCG TATTACCCAC ATTCCAACCG GGATTGTGGT GGAATGTCAG
GATCAACGTT CACAGCATAA AAACCGTGCC CAAGCGATGA GCGTGTTAGC GGCGCGTATC
CAAGCCGTTG AAGACGAAAA GCGCCGCAGC GCCGAAGAGT CGACTCGCCG TAGTCTGGTA
GCCAGTGGCG ACCGCTCCGA GCGTGTGCGT ACCTATAACT TCCCACAGGG CCGCGTGAGT
GAACACCGTA TCAACTTAAC CTTGTATCGC TTAAACGAAG TGATGGAAGG TGACTTAGAT
GCGATTTTAG GACCGCTGAT GCAAGAGCAT CAGGCCGACC TATTAGCCGC TCTGGCTGAT
GAGCAGGGGT AA
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| Protein sequence | MKESVIRKLE GLLERNEEVL ALLGDASVIA DQERFRALSK EYSQLEEVVA GFKAYQQAQA
DLESAKEMLE EDDAEMREMA QEEIKAAKAE LERLEAELQI LLLPKDPNDD TNAFIEIRAG
AGGDEAAIFA GDLFRMYSRY AEANRWQLEI MSSNEGEHGG FKEIIVKVSG EGAYGKLKFE
SGGHRVQRVP ETESQGRVHT SAVTVVVMHE VPEAEAISIN PADLKVDTFR SSGAGGQHVN
KTDSAIRITH IPTGIVVECQ DQRSQHKNRA QAMSVLAARI QAVEDEKRRS AEESTRRSLV
ASGDRSERVR TYNFPQGRVS EHRINLTLYR LNEVMEGDLD AILGPLMQEH QADLLAALAD
EQG
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