Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0739 |
Symbol | |
ID | 4476949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 858135 |
End bp | 859724 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725274 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_868383 |
Protein GI | 117919191 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG2703] Hemerythrin |
TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00129252 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCAATG TTACAGCTAA GAATGGCACC ATGGGCTACG GTATTATCTT TGCGCCTATG GTCTTACTCT TATATCCCCT CTATTGTTTA GTCACTAGTG CGCATTGGGT GGCGACGCTC TGTTTAATTG CTCTTGCCGT GATTCTTTTT TTAAACATTA ACAAATTGAG CCGTAACTTA AGGCACTTAG AACGCGCAGC CCATCACTTA GGCGATGGGG ATTTAAGTTA TCAGCTCGAT GAGAAAGATG CGGGTGTGTT TATCACGGTC GTCCACAGTA TCAACCGCAT GGGCGAGGAT GTTAGTCGCA CGATTCTCTC CCTCGTCGAT ACCAGCGAGT GGATGAAGAA AGTCGCGACC GATATCAAAG CGATCAGCGA GCAGGCAAAA CAGGGCGTGC TCGAGCAGGA GCGTCAAACC GAACTGGCAG CAACGGCCAT GACACAGATG GTCTCCACCG TACAAGAAGT GTCACAAAAT GCCGCCAGTA CGGCGCGAGC GGCCGATATT GCCCAAGGTT CGGCGAAACA TGGTGATGAG CTAATTGGCA CTATCGTAAA TAAAATCAAC GATATGAAAT CGCAAATTCA CCAAACTAAA GGCGTTATTG AGCATCTTGC CGACGATACT AATAGCATCA GCAGTATTAT TGAAACCATC TCCCAAGTGG CGGAGCAAAC AAATCTATTG GCGCTCAATG CGGCGATTGA GAGTGCGCGT GCCGGTGAGC ATGGTCGCGG TTTTGCGGTG GTTGCCGATG AAGTGCGTAA CTTAGCTAAA CGCACCTCAG AGGCTACCGC GGAAATTCAA CTGCAGATTA CAACCTTGCA AAAGGGCGCG CAGCAGAGCG TGGAAGTGAT GCTTAAGAAT GTCACCATCG CCGACGAAAC TGCCCTGATG GTGGAACAAG CTCATCAAGC CCTCGGGGAT ATAGTGACTC AGGTTGAAAG CATTACCGAT ATGTCCCACC AAATCGCTAC GGCATCCGAA GAGCAACATG CGGTTGCCGA AGAAATTAAC AAAAATATCA GTGTGATGGC TGATCTTGCA TTAAAAAATG CGCGCCATAC CAACCACACC AACTTATCCA GCCTTAAGGT GTATAACATG TCGCAGGAAA TTGGCTCCCT GCTGCATCGA TTCCATGTGG ATGCCAAGTT GTTTAATTCA AGCCAAGCAC AAAGCAAACA GTTTGTGAAA TGGGGGCCTG AGCTTGATAT CGGCATGCCA GAGATTAACC GTCAGCACCA ACGCTTAGTT TCATTAATCA ATGAATTACA CCGGACGTTA AGTGAGGCAT ACGGACTCGA AGCGATTAAG CGCATCGTCC AAGGGCTGGT GGATTACACC GCGAACCATT TCTCCTATGA AGAAGAATTG TTTGCCCGTT TTGGCTATCC TCAAACCGTG GCCCATAAGG AAAAGCATGC CCAGTTGGTT GGTCAAGTGC TTGATTTTCA AAAGCGGGTA GCGAGAGGTG AAGATGTGGC CGATGAACTT ATGGCATTTT TAAAAGCCTG GCTCGTCAAT CATATTCAAA AGAGTGATAA GGAATATACC CAATTTTTAC TCGCCCATGG GGCCGAATAA
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Protein sequence | MANVTAKNGT MGYGIIFAPM VLLLYPLYCL VTSAHWVATL CLIALAVILF LNINKLSRNL RHLERAAHHL GDGDLSYQLD EKDAGVFITV VHSINRMGED VSRTILSLVD TSEWMKKVAT DIKAISEQAK QGVLEQERQT ELAATAMTQM VSTVQEVSQN AASTARAADI AQGSAKHGDE LIGTIVNKIN DMKSQIHQTK GVIEHLADDT NSISSIIETI SQVAEQTNLL ALNAAIESAR AGEHGRGFAV VADEVRNLAK RTSEATAEIQ LQITTLQKGA QQSVEVMLKN VTIADETALM VEQAHQALGD IVTQVESITD MSHQIATASE EQHAVAEEIN KNISVMADLA LKNARHTNHT NLSSLKVYNM SQEIGSLLHR FHVDAKLFNS SQAQSKQFVK WGPELDIGMP EINRQHQRLV SLINELHRTL SEAYGLEAIK RIVQGLVDYT ANHFSYEEEL FARFGYPQTV AHKEKHAQLV GQVLDFQKRV ARGEDVADEL MAFLKAWLVN HIQKSDKEYT QFLLAHGAE
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