| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0732 |
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| Symbol | |
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| ID | 4476942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 848757 |
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| End bp | 851033 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725267 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_868376 |
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| Protein GI | 117919184 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.207588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000634577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTGACG CGATCAAGTT AAGCTTAGAT GGCGTAGAGC AGATGCCCCT GCGGCGCTTT
ACCGAAGAAG CTTATCTGAA CTATTCCATG TACGTCATCA TGGACCGAGC CTTGCCCCAT
ATCGGTGACG GGCTTAAGCC GGTGCAGCGG CGGATTATTT ATGCCATGAG TGAGCTCGGG
TTATCAGCTC AGTCAAAACA TAAAAAATCA GCCCGTACCG TCGGTGACGT ATTAGGTAAG
TACCATCCCC ATGGCGACAG CGCGTGTTAT GAGGCTATGG TACTGATGGC GCAGCCATTT
TCTTACCGTT ATCCGCTAGT CGATGGTCAA GGTAACTGGG GTGCGCCAGA CGATCCTAAG
TCCTTCGCCG CGATGCGTTA TACCGAGGCG CGCCTGTCTA AGTTCTCCGA AGTATTATTG
TCTGAGCTGG GACAAGGTAC GGTCGAATGG GGCGCTAACT TCGATGGCAC CTTGAAAGAA
CCTAAAGTGC TGCCCGCACG TTTGCCGCAT ATTTTACTCA ATGGCATCAC GGGTATCGCT
GTCGGTATGG CGACGGATAT TCCGCCCCAT AACGCTAGAG AGTTAGTCAA TGCCTGTGTG
GCACTGCTTG ACGATCCTAA ACTCGAACTT GAGCAATTGA TGGGCTATGT GCCTGGGCCT
GATTATCCGA CCGAGGCCGA GATCATCACG CCAGCGGCTG ACATTGCCAA AGTCTATGAG
ACGGGCCGTG GCTCCATAAA AGCCCGCGCC GTGTATAGCG TCGATGCTGG TGAGATAGTG
ATCACCGCGC TGCCGCACCA AGCCAGTAGC GGCAAAATTT TAGAGCAAAT CGCCGCCCAG
ATGCAGGCGA AAAAGTTGCC TATGGTGGCT GACTTACGTG ATGAGTCTGA CCACGAAAAC
CCTGTGCGAC TAGTGGTGGT GCCGCGTTCA AATCGCGTCG ATTGCGATCA ACTGATGGCG
CACTTGTTTG CGACCACAGA TCTTGAGAAA AGCTTTAGGG TAAACCTGAA CGTCTTGGGC
CTAGATGGTC GTCCACGCGT CAAAGGATTA AAAGAGCTAT TAACCGAATG GTTAGAGTTC
CGTGTCGATA CCGTAAGGCG TCGTCTCGAG TATCGCCTCG ATAAAGTCTT AGCACGGTTA
CATATCCTCG AAGCCTTGAT GATAGCCTTC CTCAATATCG ATGAAGTGAT TGAAATCATT
CGTTTCCACG ATGAGCCAAA GGCCGAGTTA ATGGCGCGCT TTAACCTGAC GGATAGGCAA
GCCGAAGCCA TCCTCGAGTT AAAGTTACGT CATTTAGCCA AGTTAGAAGA GTTTAAAATC
AAGGCCGAGC AGGATGAGCT TGAGGCCGAG CGTGAGAAAT TAGAACAGTT ATTAAGCTCA
GATCGCCGCT TAAAAACCTT GATCAAGAAA GAATTAATTC AAGATGGCGA AACCTATGGC
GACGATCGCC GCTCACCGAT TGTTGAGCGC CATGAATCCC GTGCCTTAAC CGAGCAGGAG
CTGACGCCGA GCGAGCCAGT GACTGTAGTG TTATCTGAAA AAGGCTGGGT GCGTTGCGCT
AAGGGCCATG ATATCGATGC CGAGTCTTTG TCCTATAAGG CGGGGGATCA ATATCTATGC
AGTGCGATGG GACGCAGTAA TCAGGCGGCG GTATTTATTG ATTCATCGGG ACGCGCCTTT
GCGACCGACA GTCACAGCCT GCCATCGGCG AGGAGCCAAG GCGAGCCCAT CACCACGCGC
TTTAATATGG CGCCGGGTGA AACCATGCAG CATGTGATTT TGGGTGAAGA CGAGCAATGT
TTCCTACTCG CCACCGATGC AGGTTACGGT TTTATCTGTA CTTATAACGA TATGGTGTCA
CGTAACAAGG CGGGTAAAGC CCTGTTAAGC TTACCGACGA ATGCCAAGTC TTTGCCGCCG
AGACCTATTG ACCGCAATCG CGAGATGTCG ATTCTAGCCA TCACCAATGA AGGGCGTATG
TTACTGTTTT CATTGGAAGC ATTGCCACAG TTGTCTAAGG GTAAGGGTAA CAAGATTATC
GGTATTCCGA GTGAGCGCGC TAAGAATCGT GAAGAGTTGA TGACCCACTT ACAACTTGTG
CCAGCAGACA CTTCGGTCAC CCTATGGGCA GGTAAGCGTA AACTCACCTT AAAACCGAGC
GATTTAGAGC ATTATCGGGG TGAACGTGGC CGCCGCGGCG CCAAGTTACC ACGCGGGTTA
CAACGTGTTG ATAGTGTTGA ATTAGGCGAA GGTGCAGAGG TTTTACCTAG CATTTAA
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| Protein sequence | MSDAIKLSLD GVEQMPLRRF TEEAYLNYSM YVIMDRALPH IGDGLKPVQR RIIYAMSELG
LSAQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSKFSEVLL SELGQGTVEW GANFDGTLKE PKVLPARLPH ILLNGITGIA
VGMATDIPPH NARELVNACV ALLDDPKLEL EQLMGYVPGP DYPTEAEIIT PAADIAKVYE
TGRGSIKARA VYSVDAGEIV ITALPHQASS GKILEQIAAQ MQAKKLPMVA DLRDESDHEN
PVRLVVVPRS NRVDCDQLMA HLFATTDLEK SFRVNLNVLG LDGRPRVKGL KELLTEWLEF
RVDTVRRRLE YRLDKVLARL HILEALMIAF LNIDEVIEII RFHDEPKAEL MARFNLTDRQ
AEAILELKLR HLAKLEEFKI KAEQDELEAE REKLEQLLSS DRRLKTLIKK ELIQDGETYG
DDRRSPIVER HESRALTEQE LTPSEPVTVV LSEKGWVRCA KGHDIDAESL SYKAGDQYLC
SAMGRSNQAA VFIDSSGRAF ATDSHSLPSA RSQGEPITTR FNMAPGETMQ HVILGEDEQC
FLLATDAGYG FICTYNDMVS RNKAGKALLS LPTNAKSLPP RPIDRNREMS ILAITNEGRM
LLFSLEALPQ LSKGKGNKII GIPSERAKNR EELMTHLQLV PADTSVTLWA GKRKLTLKPS
DLEHYRGERG RRGAKLPRGL QRVDSVELGE GAEVLPSI
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