Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0717 |
Symbol | |
ID | 4476927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 835586 |
End bp | 836260 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639725252 |
Product | putative hydroxylase |
Protein accession | YP_868361 |
Protein GI | 117919169 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00266806 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000189122 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTTATTG AAATTCCGAA TGTTTTTTCT AAAGAAGAAG TCAATCAGCT AAGGGAACAG CTCGATGCCC GCACTTGGAT TGATGGCAAC CAGACTTCGG GCGTAATGGC GAGTACCCGC AAGCGTAATC AGCAGTTAGA CAAAGATGAC CCTGTCGCAC TGCAAATCGG TGAGCTGATC ATGGCGCGCT TATTGGCCCA CCCTTTATTT GTCTCGGCGG CGCTGCCGCT ACAGTTTTAT CCTCCCTTGT TCAATCGTTA TCAAGGCGGC GAAACCTTTG GCTATCATAT CGATAATGCG ATCCGCTCGA CCAGCGAAGG CATGGTGCGT ACCGATCTGT CAGCCACTTT ATTTTTAAGT GAGCCAGACA CTTATCAAGG TGGTGAGCTG GTGATCCAAG ATACCTATGG TCAGCAAAGC ATTAAGCTCG CGGCGGGCTC ATTGGTGTTG TATCCCTCGA CGAGTCTGCA TCAGGTTACT CCTGTTACCT CGGGTGAACG TACCGCTGCT TTTATGTGGC TGCAGAGTAT GGTGCGCGAT GAGGGGCAGC GTCGTTTGCT ATTTCAACTC GATCAATCGA TTCAATCGTT GACGGCGCAG GCCGCGCCAG AACAAGAGTT GTTTAATCTG ACGGGGGTTT ACCATAACTT GCTCAGACGT TGGAGCGAGT TGTAG
|
Protein sequence | MLIEIPNVFS KEEVNQLREQ LDARTWIDGN QTSGVMASTR KRNQQLDKDD PVALQIGELI MARLLAHPLF VSAALPLQFY PPLFNRYQGG ETFGYHIDNA IRSTSEGMVR TDLSATLFLS EPDTYQGGEL VIQDTYGQQS IKLAAGSLVL YPSTSLHQVT PVTSGERTAA FMWLQSMVRD EGQRRLLFQL DQSIQSLTAQ AAPEQELFNL TGVYHNLLRR WSEL
|
| |