Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0700 |
Symbol | |
ID | 4476910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 817318 |
End bp | 818073 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639725235 |
Product | hypothetical protein |
Protein accession | YP_868344 |
Protein GI | 117919152 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000147849 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000148247 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTACGAG CAATGCTAAA AGTTATCGCC CCTTTGAGTT TGTTTTGCCT ATCTTTTCCG GCACTTGCGC TTGTACCTCC CGATTATCAG GAACCGCCAA GCGATTTTAC TGCAGAAGTC GAAGCCGGCT TACAATTGAA CACGGGCAAT ACCGAGTCGA GCAGTTTTAA TGGTCGCACC CAGCTGATTT ACGATGCCAA GCAAACGAAA CAAGAAGCCA CGCTAAAAGC GTATTTTGCT TCAGAGAAAA ACCAAACCAC CTCAGAGAAG TACGAACTCC AGCTGCAGAG CAACTATAAA CTCACTAAGG GTTATATCTT TGGCCGTGGT GACTTTACTT GGGATCAGTT CGGTAGTTAT ACCCAAATCT CAACCCTTTC TTCGGGTTAT GGTTTTAATG CCATCAGTAC CTATAAGACC AAACTCAGCC TCGAAGTCGG TCCGGGTTAT CGATACAACC TGCCTGCAGA ATCGGTAGCT GAGCCCGATC CCGCCGCCGA AAAGGATGTG ATTTTACGTA CTGCGGCAAA GTTTTCGCAA AAATTGCAGG AATACACCAG CATCAATGCC GATCTCACCG CCGAGGTGGG CGAGAATAAC AACACTCTCA CCCTCGACAT GAACTACAAG AACTTAGTGT TTCAAGATTG GGCATTTAAA ATCGGCATGA ACGTCAAGTA CACCGAAGTG GTTCCCGAAG GCAGTAAGCA GACTGACACA GTCACCACCT TTAACCTGCT CTACACCTTT AGATAA
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Protein sequence | MLRAMLKVIA PLSLFCLSFP ALALVPPDYQ EPPSDFTAEV EAGLQLNTGN TESSSFNGRT QLIYDAKQTK QEATLKAYFA SEKNQTTSEK YELQLQSNYK LTKGYIFGRG DFTWDQFGSY TQISTLSSGY GFNAISTYKT KLSLEVGPGY RYNLPAESVA EPDPAAEKDV ILRTAAKFSQ KLQEYTSINA DLTAEVGENN NTLTLDMNYK NLVFQDWAFK IGMNVKYTEV VPEGSKQTDT VTTFNLLYTF R
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