Gene Shewana3_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0700 
Symbol 
ID4476910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp817318 
End bp818073 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content47% 
IMG OID639725235 
Producthypothetical protein 
Protein accessionYP_868344 
Protein GI117919152 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000147849 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000148247 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTACGAG CAATGCTAAA AGTTATCGCC CCTTTGAGTT TGTTTTGCCT ATCTTTTCCG 
GCACTTGCGC TTGTACCTCC CGATTATCAG GAACCGCCAA GCGATTTTAC TGCAGAAGTC
GAAGCCGGCT TACAATTGAA CACGGGCAAT ACCGAGTCGA GCAGTTTTAA TGGTCGCACC
CAGCTGATTT ACGATGCCAA GCAAACGAAA CAAGAAGCCA CGCTAAAAGC GTATTTTGCT
TCAGAGAAAA ACCAAACCAC CTCAGAGAAG TACGAACTCC AGCTGCAGAG CAACTATAAA
CTCACTAAGG GTTATATCTT TGGCCGTGGT GACTTTACTT GGGATCAGTT CGGTAGTTAT
ACCCAAATCT CAACCCTTTC TTCGGGTTAT GGTTTTAATG CCATCAGTAC CTATAAGACC
AAACTCAGCC TCGAAGTCGG TCCGGGTTAT CGATACAACC TGCCTGCAGA ATCGGTAGCT
GAGCCCGATC CCGCCGCCGA AAAGGATGTG ATTTTACGTA CTGCGGCAAA GTTTTCGCAA
AAATTGCAGG AATACACCAG CATCAATGCC GATCTCACCG CCGAGGTGGG CGAGAATAAC
AACACTCTCA CCCTCGACAT GAACTACAAG AACTTAGTGT TTCAAGATTG GGCATTTAAA
ATCGGCATGA ACGTCAAGTA CACCGAAGTG GTTCCCGAAG GCAGTAAGCA GACTGACACA
GTCACCACCT TTAACCTGCT CTACACCTTT AGATAA
 
Protein sequence
MLRAMLKVIA PLSLFCLSFP ALALVPPDYQ EPPSDFTAEV EAGLQLNTGN TESSSFNGRT 
QLIYDAKQTK QEATLKAYFA SEKNQTTSEK YELQLQSNYK LTKGYIFGRG DFTWDQFGSY
TQISTLSSGY GFNAISTYKT KLSLEVGPGY RYNLPAESVA EPDPAAEKDV ILRTAAKFSQ
KLQEYTSINA DLTAEVGENN NTLTLDMNYK NLVFQDWAFK IGMNVKYTEV VPEGSKQTDT
VTTFNLLYTF R