| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0670 |
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| Symbol | |
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| ID | 4476880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 791202 |
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| End bp | 791645 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725205 |
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| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | YP_868314 |
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| Protein GI | 117919122 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0080216 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.145072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTTC GTACCATACT GCGGCCGGAA TGCACGACCT GCGCCACTCC GGGCAGTAAG
AAAAAGGTAC TGGAACTTAT CAGCGACTTA GCCGCTGCCC AGTACCCCAC CCTCTCATCT
CAAGAGATCT TCGAAAGCCT AGTGGCGCGC GAAAAGATGG GGAGCACAGG TATAGGTAAC
GGCATCGCCA TTCCACATGG TCGATTAACC GATATAACAC AACCCATAGC CATATTGGTG
AAATGTGAGG AGCCGATAGC CTTTGATGCT ATCGATAAAC AACCTGTCGA CATTTTATTT
GCGCTGCTGG TGCCTGCTGA CCAATGTCAA CAGCACTTAA GCACTTTGTC CTGCATGGCA
GAAAAGCTCA GCGACAAACA AATATTGAAG CAATTGCGCA AGACGCATGA TGAAACGGAA
CTCTATCAGG TAATCACTGG ATGA
|
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| Protein sequence | MELRTILRPE CTTCATPGSK KKVLELISDL AAAQYPTLSS QEIFESLVAR EKMGSTGIGN
GIAIPHGRLT DITQPIAILV KCEEPIAFDA IDKQPVDILF ALLVPADQCQ QHLSTLSCMA
EKLSDKQILK QLRKTHDETE LYQVITG
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